Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.3□□□□□ -1.56
ERCC4Q92889 OR6C73P-201ENST00000546432 358 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 SULT1C2P1-202ENST00000562418 459 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AP005205.1-201ENST00000563503 508 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 MTCO3P24-201ENST00000572729 782 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.3□□□□□ -1.56
ERCC4Q92889 AC243773.3-201ENST00000613270 256 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC009237.17-201ENST00000618111 748 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 AC116563.2-201ENST00000624751 535 ntBASIC5.3□□□□□ -1.56
ERCC4Q92889 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.3□□□□□ -1.56
ERCC4Q92889 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ERCC4Q92889 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.3□□□□□ -1.56
ERCC4Q92889 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ERCC4Q92889 USP9YP4-201ENST00000424401 1745 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ERCC4Q92889 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC4Q92889 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC4Q92889 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 OR4A15-201ENST00000314706 1035 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ERCC4Q92889 RNU5A-6P-201ENST00000384136 116 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 HSPD1P16-201ENST00000402302 394 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AL078604.1-201ENST00000404609 466 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 SNORA11B-201ENST00000408175 129 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 RNA5SP146-201ENST00000410743 123 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC008280.1-201ENST00000418851 412 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC093162.1-201ENST00000419682 124 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 Z97055.1-201ENST00000419730 712 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 USP9YP18-201ENST00000425912 695 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 NPM1P24-201ENST00000428039 894 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC4Q92889 RPL37P21-201ENST00000435890 276 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC122718.1-201ENST00000439448 744 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC244505.5-201ENST00000443639 207 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC112498.1-201ENST00000444401 332 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 FAM133DP-201ENST00000464802 691 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC093270.2-201ENST00000486157 792 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 DEFB109F-201ENST00000491870 277 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 RPL7P24-201ENST00000493052 752 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 RN7SL808P-201ENST00000496066 299 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AL358832.1-201ENST00000497800 389 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC093809.1-201ENST00000509155 340 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC068587.4-201ENST00000533893 186 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC4Q92889 SERPINE4P-201ENST00000554978 281 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC068135.2-201ENST00000569293 1028 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.29□□□□□ -1.56
ERCC4Q92889 AC091834.1-201ENST00000614543 472 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.29□□□□□ -1.56
ERCC4Q92889 CR392039.4-201ENST00000624968 501 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AL008636.1-201ENST00000625038 1018 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AC019226.1-201ENST00000625666 515 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 OR5AK4P-201ENST00000635912 903 ntBASIC5.29□□□□□ -1.56
ERCC4Q92889 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.29□□□□□ -1.56
ERCC4Q92889 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ERCC4Q92889 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ERCC4Q92889 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ERCC4Q92889 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC4Q92889 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC4Q92889 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 RNU6-984P-201ENST00000363236 109 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 RNA5SP123-201ENST00000363244 119 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 MIR181A1-201ENST00000385026 110 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 MIR195-201ENST00000385194 87 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 SNORA40.3-201ENST00000390964 122 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 RPL17P50-201ENST00000396131 546 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC4Q92889 Z97832.1-201ENST00000402490 328 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 RNU2-28P-201ENST00000410457 189 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AIMP1P1-201ENST00000418670 937 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AL356583.2-201ENST00000426536 280 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms