Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC010300.1-201ENST00000600671 5134 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A3Q8N4M1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC093591.2-201ENST00000565254 3843 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC100778.3-201ENST00000580060 1750 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-582P-201ENST00000362989 107 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP366-201ENST00000365454 123 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 UBBP2-201ENST00000376781 231 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 SNORD116-23-201ENST00000384645 92 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RNU6-114P-201ENST00000384704 105 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 SDHCP2-201ENST00000398565 501 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC016831.2-201ENST00000417179 352 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AL109913.1-201ENST00000421173 514 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC009237.2-201ENST00000421358 284 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC093698.1-201ENST00000423843 571 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 PPIAP17-201ENST00000438507 471 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC092809.1-201ENST00000441469 474 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 Z95327.1-201ENST00000446082 482 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MTND2P24-201ENST00000453434 806 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RN7SL98P-201ENST00000462271 300 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC010307.1-201ENST00000467206 836 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 UQCRHP4-201ENST00000471686 272 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC015724.1-201ENST00000478577 156 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC041039.1-201ENST00000485656 536 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC022483.1-201ENST00000514020 567 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AP002453.2-201ENST00000533503 320 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AL596327.1-201ENST00000603629 213 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC091965.4-201ENST00000607691 587 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 TUG1_1.1-201ENST00000610654 145 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 AC091304.9-201ENST00000612091 226 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 FAM157B-203ENST00000639350 358 ntBASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A3Q8N4M1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 RN7SKP224-201ENST00000364140 325 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 SNORD115-47-201ENST00000391226 86 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL359643.1-201ENST00000404109 423 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL139098.1-201ENST00000407291 389 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 RNA5SP296-201ENST00000410523 111 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 HMGN1P14-201ENST00000412459 517 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL450992.3-201ENST00000413192 568 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC013429.2-201ENST00000418798 781 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL513175.1-201ENST00000431492 780 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 MTCO3P18-201ENST00000440206 761 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 RPL23AP93-201ENST00000440847 484 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 PHBP16-201ENST00000446318 950 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC002553.2-201ENST00000453217 340 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 AC034236.1-201ENST00000469891 373 ntBASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A3Q8N4M1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms