Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS8Q8N3P4 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.22□□□□□ -1.73
VPS8Q8N3P4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 HSPD1P16-201ENST00000402302 394 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AL603766.1-201ENST00000407763 664 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AC073508.1-201ENST00000428866 656 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 RPS20P5-201ENST00000434808 360 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 MRPL50P4-201ENST00000446432 475 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.21□□□□□ -1.73
VPS8Q8N3P4 RNU4-29P-201ENST00000515943 174 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 SNORA31.21-201ENST00000517180 77 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AC243972.3-201ENST00000539655 198 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 HMGB3P26-201ENST00000560051 582 ntBASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.21□□□□□ -1.73
VPS8Q8N3P4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.21□□□□□ -1.73
VPS8Q8N3P4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AL450326.2-201ENST00000421913 1962 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 RPS4XP8-201ENST00000402039 771 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AP001207.1-201ENST00000524051 481 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.21□□□□□ -1.74
VPS8Q8N3P4 MIR4635-201ENST00000583759 79 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AC008277.2-201ENST00000605196 797 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 AC090229.1-201ENST00000590983 1609 ntBASIC4.21□□□□□ -1.74
VPS8Q8N3P4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 RPL9P7-201ENST00000330965 580 ntBASIC4.2□□□□□ -1.74
VPS8Q8N3P4 MIR137-201ENST00000385223 102 ntBASIC4.2□□□□□ -1.74
VPS8Q8N3P4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AC147055.1-201ENST00000509261 750 ntBASIC4.2□□□□□ -1.74
VPS8Q8N3P4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AC008126.1-201ENST00000549019 480 ntBASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AL109741.3-201ENST00000561748 592 ntBASIC4.2□□□□□ -1.74
VPS8Q8N3P4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS8Q8N3P4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 PTP4A1P5-201ENST00000420305 455 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 RN7SL432P-201ENST00000484057 298 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AC006445.2-201ENST00000510061 472 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AC022146.1-201ENST00000595307 847 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AC004832.5-201ENST00000608677 401 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 AP006248.2-201ENST00000623309 592 ntBASIC4.19□□□□□ -1.74
VPS8Q8N3P4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS8Q8N3P4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AL355379.1-201ENST00000405542 640 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AC244505.4-201ENST00000434905 287 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 SSXP5-201ENST00000443473 287 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 SRIP1-201ENST00000489235 288 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AC118465.1-201ENST00000513820 1271 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AC012119.1-201ENST00000603184 222 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 AC103881.1-201ENST00000603476 538 ntBASIC4.18□□□□□ -1.74
VPS8Q8N3P4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS8Q8N3P4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AL021368.2-201ENST00000606125 5352 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 MIR449A-201ENST00000362113 91 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AL031679.1-201ENST00000400616 525 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 MTND4LP20-201ENST00000402379 270 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AC016687.1-201ENST00000482574 353 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 RN7SL297P-201ENST00000483161 293 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS8Q8N3P4 SERPINE4P-201ENST00000554978 281 ntBASIC4.17□□□□□ -1.74
VPS8Q8N3P4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms