Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC107982.1-201ENST00000507171 1300 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC116667.1-201ENST00000604855 2072 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC106754.1-201ENST00000562632 1513 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 OR11H4-201ENST00000315409 1082 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 NACA3P-201ENST00000359690 648 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 SNORA40.2-201ENST00000390847 128 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 SNORA48.7-201ENST00000391302 135 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 MTND4LP20-201ENST00000402379 270 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 RNA5SP56-201ENST00000410277 118 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 RPL36AP36-201ENST00000418616 301 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 TPTE2P3-201ENST00000441562 1189 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 RPL23AP44-201ENST00000482216 473 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC078918.1-201ENST00000498515 228 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC108078.3-201ENST00000502633 489 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC010460.2-201ENST00000509054 677 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC023141.12-201ENST00000512399 199 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC108064.1-201ENST00000513791 460 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 MED28P5-201ENST00000528254 438 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AP004242.1-201ENST00000533701 349 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC007424.1-203ENST00000554613 687 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC074050.1-201ENST00000563247 211 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC079171.1-201ENST00000568788 914 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC006270.2-201ENST00000578523 652 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC024933.1-201ENST00000608472 348 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AC016597.2-201ENST00000613256 341 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 LINC02211-204ENST00000642024 1070 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 RLIMP1-201ENST00000339626 1680 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 AL157700.1-201ENST00000561973 1432 ntBASIC4.18□□□□□ -1.74
PRPF39Q86UA1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF39Q86UA1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 Z82217.1-201ENST00000625157 8149 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RNU5D-1-201ENST00000363299 116 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RN7SKP202-201ENST00000410439 330 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 PGBD4P8-201ENST00000412993 562 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 EI24P1-201ENST00000416584 867 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC013410.2-201ENST00000422627 201 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC011742.1-201ENST00000431448 434 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RPL21P112-201ENST00000434403 463 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 EEF1A1P39-201ENST00000440791 250 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 VN1R10P-201ENST00000447106 875 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 PABPC1P3-201ENST00000469174 459 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RPL31P61-201ENST00000496160 376 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 UBE2V1P12-201ENST00000503954 474 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 TPT1P8-201ENST00000510120 555 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RNU7-143P-201ENST00000516781 65 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC107016.1-201ENST00000550463 337 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 TRAV15-201ENST00000556680 249 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AL360157.1-201ENST00000565962 87 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 RPL23AP87-202ENST00000573039 466 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC114878.2-201ENST00000604863 1251 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AL138478.1-201ENST00000612252 832 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 MIR6875-201ENST00000617506 72 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AC022509.4-201ENST00000621404 572 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AP005264.7-201ENST00000625003 745 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AL773545.4-201ENST00000637262 310 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 AL513478.4-201ENST00000641636 310 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 GDI2P1-201ENST00000429312 1336 ntBASIC4.17□□□□□ -1.74
PRPF39Q86UA1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF39Q86UA1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms