Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC243773.3-201ENST00000613270 256 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL354950.2-201ENST00000617939 290 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC135068.12-201ENST00000637370 931 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC093909.5-201ENST00000621839 1799 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 RNA5SP183-201ENST00000362452 119 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 Y_RNA.47-201ENST00000362697 108 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 Y_RNA.149-201ENST00000363558 117 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC005042.1-201ENST00000393397 800 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 MTCYBP4-201ENST00000401524 249 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 Y_RNA.615-201ENST00000410769 117 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 RNF10P1-201ENST00000418589 369 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC005517.2-201ENST00000424673 553 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 MTCYBP10-201ENST00000424905 650 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 SNRPEP7-201ENST00000438350 220 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AL162395.1-201ENST00000457882 422 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 RN7SL583P-201ENST00000475692 287 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC078785.3-201ENST00000476607 425 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC012181.1-201ENST00000479895 423 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 RPSAP50-201ENST00000481955 852 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 RNA5SP228-201ENST00000516232 133 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AP005902.1-201ENST00000521358 186 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 PTP4A1P6-201ENST00000531034 478 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC006206.1-201ENST00000544842 3387 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AL161670.1-201ENST00000554348 137 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC010632.3-201ENST00000611377 369 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC025574.2-201ENST00000615621 514 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC009318.4-201ENST00000620496 486 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC026634.1-201ENST00000634369 198 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 AC119674.1-212ENST00000641155 993 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF43Q68DV7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.78□□□□□ -1.48
RNF43Q68DV7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF43Q68DV7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
RNF43Q68DV7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 RNU5E-1-201ENST00000362477 120 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RNU6-666P-201ENST00000363499 107 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 RNU4-20P-201ENST00000365601 151 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL583835.1-201ENST00000399570 407 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL645733.1-201ENST00000402250 217 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC017078.1-201ENST00000416146 368 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 HSPE1P1-201ENST00000421494 318 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL590762.4-201ENST00000425885 253 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF43Q68DV7 FABP7P2-201ENST00000429946 379 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF43Q68DV7 OR6D1P-201ENST00000436165 939 ntBASIC5.77□□□□□ -1.49
RNF43Q68DV7 AL137792.2-201ENST00000443484 235 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms