Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC38Q502W7 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 AC139769.1-204ENST00000472297 1931 ntBASIC4.6□□□□□ -1.67
CCDC38Q502W7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC38Q502W7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC125257.1-201ENST00000560400 2930 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 OR5H2-201ENST00000355273 945 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 RNY3P9-201ENST00000384727 106 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 RNU6-253P-201ENST00000384730 105 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AMD1P2-201ENST00000412936 992 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 ZYG11AP1-201ENST00000430329 837 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 HLA-N-201ENST00000437516 135 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AL133217.1-201ENST00000450980 425 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 VN1R32P-201ENST00000452234 905 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 ZNF137P-201ENST00000456718 1920 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 RNU7-136P-201ENST00000458819 69 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC087312.1-201ENST00000471411 480 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC011005.3-201ENST00000491624 395 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 PARP4P3-201ENST00000510265 317 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 RNA5SP216-201ENST00000516111 123 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 RNU6-150P-201ENST00000516237 95 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC022861.1-201ENST00000522981 663 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC020914.6-201ENST00000594327 272 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC083899.3-201ENST00000603413 594 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 IGHV3-29-201ENST00000604817 344 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC38Q502W7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.59□□□□□ -1.67
CCDC38Q502W7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC38Q502W7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC38Q502W7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 LINC00622-201ENST00000562811 1570 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AL356473.1-201ENST00000406203 1408 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 RPL23AP57-201ENST00000332361 466 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 SNORA71.2-201ENST00000364941 134 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 MIR659-201ENST00000384963 97 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 CYCSP45-201ENST00000402289 315 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 JKAMPP1-201ENST00000413804 919 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AL592293.2-201ENST00000422292 996 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC234781.2-201ENST00000426370 994 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 RPS6P12-201ENST00000432491 726 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 SUMO2P2-201ENST00000456482 255 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 snoU13.3-201ENST00000459441 104 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC079804.1-201ENST00000461922 436 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 HSPE1P23-201ENST00000509838 286 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 MTND1P22-201ENST00000510572 951 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC119751.5-201ENST00000514077 770 ntBASIC4.58□□□□□ -1.68
CCDC38Q502W7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC38Q502W7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC38Q502W7 CYP4A43P-201ENST00000568156 121 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms