Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SAGE2P-201ENST00000420011 2126 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AL122126.1-201ENST00000546905 1318 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 RNU5E-5P-201ENST00000365379 116 ntBASIC4.3□□□□□ -1.72
RAE1P78406 RNU6-348P-201ENST00000384386 107 ntBASIC4.3□□□□□ -1.72
RAE1P78406 RNU6-1215P-201ENST00000384441 102 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC136624.1-201ENST00000400791 413 ntBASIC4.3□□□□□ -1.72
RAE1P78406 MIR1305-201ENST00000408300 86 ntBASIC4.3□□□□□ -1.72
RAE1P78406 MIR320C1-201ENST00000408566 88 ntBASIC4.3□□□□□ -1.72
RAE1P78406 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC009237.10-201ENST00000414112 510 ntBASIC4.3□□□□□ -1.72
RAE1P78406 FNDC3CP-201ENST00000420795 1155 ntBASIC4.3□□□□□ -1.72
RAE1P78406 OFD1P18Y-201ENST00000420889 959 ntBASIC4.3□□□□□ -1.72
RAE1P78406 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.3□□□□□ -1.72
RAE1P78406 COX6CP17-201ENST00000421389 185 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.3□□□□□ -1.72
RAE1P78406 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.3□□□□□ -1.72
RAE1P78406 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.3□□□□□ -1.72
RAE1P78406 AL450263.2-201ENST00000439400 589 ntBASIC4.3□□□□□ -1.72
RAE1P78406 RPL23AP93-201ENST00000440847 484 ntBASIC4.3□□□□□ -1.72
RAE1P78406 MTND5P14-201ENST00000441481 1267 ntBASIC4.3□□□□□ -1.72
RAE1P78406 PAXBP1P1-201ENST00000449315 447 ntBASIC4.3□□□□□ -1.72
RAE1P78406 CEACAMP6-201ENST00000452007 574 ntBASIC4.3□□□□□ -1.72
RAE1P78406 USP9YP34-201ENST00000453983 808 ntBASIC4.3□□□□□ -1.72
RAE1P78406 SRRM1P2-201ENST00000464531 1192 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 AC022447.3-201ENST00000506865 495 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC109464.2-201ENST00000510242 943 ntBASIC4.3□□□□□ -1.72
RAE1P78406 COX6CP8-201ENST00000522620 226 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AP002453.2-201ENST00000533503 320 ntBASIC4.3□□□□□ -1.72
RAE1P78406 OR6C73P-201ENST00000546432 358 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.3□□□□□ -1.72
RAE1P78406 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 MTND1P15-201ENST00000579262 949 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.3□□□□□ -1.72
RAE1P78406 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.3□□□□□ -1.72
RAE1P78406 AC091805.2-201ENST00000603848 235 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.3□□□□□ -1.72
RAE1P78406 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 AC091953.3-201ENST00000623220 236 ntBASIC4.3□□□□□ -1.72
RAE1P78406 AC093591.3-201ENST00000634516 308 ntBASIC4.3□□□□□ -1.72
RAE1P78406 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.3□□□□□ -1.72
RAE1P78406 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.3□□□□□ -1.72
RAE1P78406 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAE1P78406 AL022578.1-201ENST00000439330 1433 ntBASIC4.29□□□□□ -1.72
RAE1P78406 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
RAE1P78406 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 RNU4-44P-201ENST00000363050 141 ntBASIC4.29□□□□□ -1.72
RAE1P78406 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
RAE1P78406 RNU6-952P-201ENST00000391164 108 ntBASIC4.29□□□□□ -1.72
RAE1P78406 ELOCP17-201ENST00000414751 326 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.29□□□□□ -1.72
RAE1P78406 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.29□□□□□ -1.72
RAE1P78406 AL360081.1-201ENST00000428299 555 ntBASIC4.29□□□□□ -1.72
RAE1P78406 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AC109583.1-201ENST00000432156 268 ntBASIC4.29□□□□□ -1.72
RAE1P78406 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 LSM1P1-201ENST00000438629 273 ntBASIC4.29□□□□□ -1.72
RAE1P78406 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
RAE1P78406 MTND1P27-201ENST00000451117 902 ntBASIC4.29□□□□□ -1.72
RAE1P78406 OR9M1P-201ENST00000459641 921 ntBASIC4.29□□□□□ -1.72
RAE1P78406 RPL31P50-201ENST00000471002 296 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AC096751.1-202ENST00000502691 1067 ntBASIC4.29□□□□□ -1.72
RAE1P78406 RNF138P1-201ENST00000502765 546 ntBASIC4.29□□□□□ -1.72
RAE1P78406 PRELID3BP7-201ENST00000503606 469 ntBASIC4.29□□□□□ -1.72
RAE1P78406 MTND2P33-201ENST00000506452 1031 ntBASIC4.29□□□□□ -1.72
RAE1P78406 PAICSP4-201ENST00000517543 1253 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AP002748.2-201ENST00000528671 348 ntBASIC4.29□□□□□ -1.72
RAE1P78406 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.29□□□□□ -1.72
RAE1P78406 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AC027807.1-201ENST00000559921 996 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.29□□□□□ -1.72
RAE1P78406 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
RAE1P78406 MIR544B-201ENST00000582372 78 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.29□□□□□ -1.72
RAE1P78406 AL589743.7-201ENST00000612637 233 ntBASIC4.29□□□□□ -1.72
RAE1P78406 AC138932.5-201ENST00000617759 563 ntBASIC4.29□□□□□ -1.72
RAE1P78406 CRYM-AS1-204ENST00000637983 556 ntBASIC4.29□□□□□ -1.72
RAE1P78406 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RAE1P78406 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms