Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC1.9□□□□□ -2.11
RPS28P62857 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.9□□□□□ -2.11
RPS28P62857 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC1.9□□□□□ -2.11
RPS28P62857 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 TRAV15-201ENST00000556680 249 ntBASIC1.9□□□□□ -2.11
RPS28P62857 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC1.9□□□□□ -2.11
RPS28P62857 AC090888.3-201ENST00000558917 509 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC105129.1-201ENST00000560250 297 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.9□□□□□ -2.11
RPS28P62857 AC084783.1-201ENST00000565846 910 ntBASIC1.9□□□□□ -2.11
RPS28P62857 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 AL589765.6-201ENST00000601909 549 ntBASIC1.9□□□□□ -2.11
RPS28P62857 PRR13P3-201ENST00000603578 376 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AL645944.1-201ENST00000603857 493 ntBASIC1.9□□□□□ -2.11
RPS28P62857 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 OR10AB1P-201ENST00000609613 938 ntBASIC1.9□□□□□ -2.11
RPS28P62857 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
RPS28P62857 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RPS28P62857 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.9□□□□□ -2.11
RPS28P62857 CRYM-AS1-204ENST00000637983 556 ntBASIC1.9□□□□□ -2.11
RPS28P62857 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC1.9□□□□□ -2.11
RPS28P62857 OR52H1-202ENST00000641796 1061 ntBASIC1.9□□□□□ -2.11
RPS28P62857 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPS28P62857 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS28P62857 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.89□□□□□ -2.11
RPS28P62857 RNA5SP335-201ENST00000363817 110 ntBASIC1.89□□□□□ -2.11
RPS28P62857 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS28P62857 MIR199A2-201ENST00000385289 110 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL353133.1-201ENST00000407695 401 ntBASIC1.89□□□□□ -2.11
RPS28P62857 RN7SKP33-201ENST00000410942 340 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS28P62857 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC099677.1-201ENST00000420575 175 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 ETF1P3-201ENST00000430422 1160 ntBASIC1.89□□□□□ -2.11
RPS28P62857 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 CST9LP2-201ENST00000437612 320 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC008264.1-201ENST00000447612 367 ntBASIC1.89□□□□□ -2.11
RPS28P62857 ST13P20-201ENST00000447996 1065 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.89□□□□□ -2.11
RPS28P62857 RN7SL372P-201ENST00000461982 298 ntBASIC1.89□□□□□ -2.11
RPS28P62857 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.89□□□□□ -2.11
RPS28P62857 RPL7P38-201ENST00000488396 739 ntBASIC1.89□□□□□ -2.11
RPS28P62857 RN7SL193P-201ENST00000491708 276 ntBASIC1.89□□□□□ -2.11
RPS28P62857 DYNLL1P6-201ENST00000503440 264 ntBASIC1.89□□□□□ -2.11
RPS28P62857 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC008676.3-201ENST00000521237 435 ntBASIC1.89□□□□□ -2.11
RPS28P62857 C1DP5-201ENST00000525775 383 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 GLYCAM1-201ENST00000546596 285 ntBASIC1.89□□□□□ -2.11
RPS28P62857 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 AC011260.1-201ENST00000578420 472 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC1.89□□□□□ -2.11
RPS28P62857 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 AL160237.3-201ENST00000604114 1013 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL049829.3-202ENST00000604278 711 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL591034.3-201ENST00000605511 685 ntBASIC1.89□□□□□ -2.11
RPS28P62857 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 AC069200.1-201ENST00000609511 323 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AL136295.6-201ENST00000610486 658 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC004852.3-201ENST00000614131 326 ntBASIC1.89□□□□□ -2.11
RPS28P62857 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 AL732618.1-201ENST00000623251 301 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC027309.3-201ENST00000623419 351 ntBASIC1.89□□□□□ -2.11
RPS28P62857 AC073862.2-201ENST00000625114 701 ntBASIC1.89□□□□□ -2.11
RPS28P62857 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.89□□□□□ -2.11
RPS28P62857 AC068620.4-201ENST00000636730 1182 ntBASIC1.89□□□□□ -2.11
RPS28P62857 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPS28P62857 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPS28P62857 AP004289.2-201ENST00000444413 1457 ntBASIC1.88□□□□□ -2.11
RPS28P62857 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RPS28P62857 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPS28P62857 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RPS28P62857 RNU1-130P-201ENST00000363930 160 ntBASIC1.88□□□□□ -2.11
RPS28P62857 RNA5SP77-201ENST00000365394 120 ntBASIC1.88□□□□□ -2.11
RPS28P62857 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPS28P62857 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms