Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC139103.1-201ENST00000534696 1030 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN6P56747 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 AC067852.3-201ENST00000589177 561 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AC110741.2-201ENST00000605278 268 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AL359535.1-201ENST00000612100 1087 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN6P56747 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 XPOTP1-201ENST00000443317 2398 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 RAD1P1-201ENST00000231383 813 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AC083799.1-201ENST00000366451 910 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 GSTA8P-201ENST00000404253 637 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 MTND4P22-201ENST00000413116 1169 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 AL590623.1-201ENST00000427864 105 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 XKRY2-201ENST00000442362 1093 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 RPS15AP29-201ENST00000445539 400 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 RSL24D1P3-201ENST00000449255 495 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC099563.1-201ENST00000456086 418 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 HMGN2P7-201ENST00000456186 273 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 S100A11P2-201ENST00000467589 312 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AC011825.1-201ENST00000484967 388 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN6P56747 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 MIR4644-201ENST00000579929 84 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 AC015849.2-201ENST00000605738 409 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AC016911.1-201ENST00000613297 452 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 MIR4278-201ENST00000636094 69 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN6P56747 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLDN6P56747 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
CLDN6P56747 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN6P56747 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN6P56747 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN6P56747 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLDN6P56747 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN6P56747 AL355379.1-201ENST00000405542 640 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 MIR1183-201ENST00000408856 89 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 RNU2-37P-201ENST00000410695 177 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 PTP4A1P5-201ENST00000420305 455 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 USP9YP36-201ENST00000424581 829 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 MOB1AP1-201ENST00000430903 535 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 USP9YP31-201ENST00000431405 881 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC006028.1-201ENST00000438379 402 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN6P56747 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC005921.1-201ENST00000510589 286 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 NDUFB4P9-201ENST00000511646 388 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 OR5AK3P-201ENST00000527486 1297 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN6P56747 OR4C2P-201ENST00000530855 1064 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AL121603.1-201ENST00000553815 142 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC010928.3-201ENST00000587712 541 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 CKS1BP3-201ENST00000600888 237 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 Z82195.1-201ENST00000604558 398 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AC079610.2-201ENST00000604818 690 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 AL034351.1-201ENST00000605288 668 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 HMGN2P28-201ENST00000606102 262 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN6P56747 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN6P56747 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 U6.107-201ENST00000637108 79 ntBASIC3.28□□□□□ -1.88
CLDN6P56747 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLDN6P56747 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CLDN6P56747 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms