Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL451086.1-201ENST00000605596 223 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC121761.2-201ENST00000617300 689 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKNOX1P55347 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKNOX1P55347 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PKNOX1P55347 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX1P55347 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX1P55347 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKNOX1P55347 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RNA5SP51-201ENST00000364750 119 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKNOX1P55347 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX1P55347 RNU6-1151P-201ENST00000384684 107 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 DSTNP4-201ENST00000399472 474 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PKNOX1P55347 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC241520.1-201ENST00000422654 1099 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX1P55347 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RPL36P19-201ENST00000430744 301 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC006994.1-201ENST00000438212 839 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RPL23AP33-201ENST00000442301 452 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 Z77249.1-201ENST00000444622 1175 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AL096829.2-201ENST00000446582 742 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX1P55347 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RN7SL385P-201ENST00000468873 276 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX1P55347 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC005921.1-201ENST00000510589 286 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 HIGD1AP3-201ENST00000515857 278 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 MED28P5-201ENST00000528254 438 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC113192.3-201ENST00000529152 742 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AP004242.1-201ENST00000533701 349 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC020914.6-201ENST00000594327 272 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC133794.1-201ENST00000602731 914 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 RPL21P136-201ENST00000605378 396 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PKNOX1P55347 MIR4278-201ENST00000636094 69 ntBASIC3.39□□□□□ -1.87
PKNOX1P55347 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKNOX1P55347 AC025263.3-201ENST00000622965 1396 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
PKNOX1P55347 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 ZNF849P-201ENST00000594711 1566 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
PKNOX1P55347 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PKNOX1P55347 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX1P55347 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
PKNOX1P55347 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.38□□□□□ -1.87
PKNOX1P55347 U8.11-201ENST00000384699 133 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 U8.12-201ENST00000384701 133 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AP002784.2-201ENST00000397300 549 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 BTBD10P2-201ENST00000404779 676 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 RNA5SP107-201ENST00000411358 122 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AL009174.1-201ENST00000426577 416 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 RPL23AP82-202ENST00000427528 469 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC004975.1-201ENST00000428733 208 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 PSMA2P3-201ENST00000429685 675 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AL512637.2-201ENST00000431287 1256 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 RPL21P110-201ENST00000433345 446 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX1P55347 RPS15AP1-201ENST00000457423 391 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 U8.18-201ENST00000459285 133 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 CENPBD1P1-201ENST00000464061 469 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 PRDX3P4-201ENST00000470828 747 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX1P55347 NPM1P41-201ENST00000512920 831 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 PRELID3BP4-201ENST00000515476 571 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 FABP5P12-201ENST00000515543 389 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC107934.2-201ENST00000518653 310 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 SOD1P3-201ENST00000518682 454 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC017100.2-201ENST00000584628 355 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AL158211.2-201ENST00000607282 395 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AL391497.1-201ENST00000608671 547 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC112503.2-201ENST00000609005 552 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 AC032011.1-201ENST00000611703 1549 ntBASIC3.38□□□□□ -1.87
PKNOX1P55347 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX1P55347 AC010733.2-201ENST00000589496 5702 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms