Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 RNU6-582P-201ENST00000362989 107 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RNU6-115P-201ENST00000364310 107 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 AL079342.2-201ENST00000403367 482 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 MTCO3P31-201ENST00000405526 789 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RPS20P14-201ENST00000412545 360 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AC106883.1-201ENST00000418805 562 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 DPRXP1-201ENST00000426312 460 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RAC1P8-201ENST00000427086 527 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
LIMK1P53667 NANOGP6-201ENST00000429190 847 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 MTCO1P3-201ENST00000429327 192 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 ELOCP8-201ENST00000439309 332 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 ELOCP15-201ENST00000442090 332 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AL031313.1-201ENST00000448435 256 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMK1P53667 NF1P3-201ENST00000457709 450 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 GTF2IP9-201ENST00000502460 301 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RNU1-95P-201ENST00000516357 160 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RNU6-885P-201ENST00000516607 104 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RNU1-128P-201ENST00000516704 160 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 RNA5SP135-201ENST00000517019 125 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 OR10V3P-201ENST00000525712 725 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.1□□□□□ -1.75
LIMK1P53667 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC005412.1-201ENST00000580812 1049 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC091178.1-203ENST00000584586 279 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 MTCO2P2-201ENST00000591258 225 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMK1P53667 AL009028.1-201ENST00000604895 802 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 HMGN2P28-201ENST00000606102 262 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AC008966.2-201ENST00000606157 453 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC024060.1-201ENST00000607052 494 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 CYCSP41-201ENST00000616920 296 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AC090772.4-201ENST00000623599 362 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 AL034408.1-202ENST00000636088 415 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 FP325313.1-201ENST00000638228 703 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMK1P53667 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 MTND5P1-201ENST00000445440 1375 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 AP001148.1-201ENST00000624124 2359 ntBASIC4.1□□□□□ -1.75
LIMK1P53667 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMK1P53667 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.09□□□□□ -1.75
LIMK1P53667 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LIMK1P53667 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LIMK1P53667 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.75
LIMK1P53667 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LIMK1P53667 RNU6-1066P-201ENST00000363573 105 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 RNU6-1243P-201ENST00000364028 107 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 SNORA72.3-201ENST00000365074 132 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 RNU1-44P-201ENST00000384453 163 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 RNU6-584P-201ENST00000410350 95 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LIMK1P53667 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 AC005517.2-201ENST00000424673 553 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 PRDX3P3-201ENST00000447765 522 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 RPL38P1-201ENST00000460914 211 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 PLGLA-201ENST00000465668 449 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC078785.3-201ENST00000476607 425 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.09□□□□□ -1.75
LIMK1P53667 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.09□□□□□ -1.75
LIMK1P53667 AP001207.2-201ENST00000519490 539 ntBASIC4.09□□□□□ -1.75
LIMK1P53667 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMK1P53667 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.09□□□□□ -1.75
LIMK1P53667 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms