Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 VTA1P1-201ENST00000414044 866 ntBASIC3.67□□□□□ -1.82
ACLYP53396 AC092832.1-201ENST00000422934 400 ntBASIC3.67□□□□□ -1.82
ACLYP53396 RPL23AP69-201ENST00000431134 458 ntBASIC3.67□□□□□ -1.82
ACLYP53396 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.67□□□□□ -1.82
ACLYP53396 ZNF965P-201ENST00000432501 817 ntBASIC3.67□□□□□ -1.82
ACLYP53396 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.67□□□□□ -1.82
ACLYP53396 ARL5AP2-201ENST00000444698 533 ntBASIC3.67□□□□□ -1.82
ACLYP53396 FTH1P25-201ENST00000447665 469 ntBASIC3.67□□□□□ -1.82
ACLYP53396 AC140076.1-201ENST00000449897 361 ntBASIC3.67□□□□□ -1.82
ACLYP53396 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.67□□□□□ -1.82
ACLYP53396 SNORA48.9-201ENST00000516419 162 ntBASIC3.67□□□□□ -1.82
ACLYP53396 RN7SKP234-201ENST00000517173 224 ntBASIC3.67□□□□□ -1.82
ACLYP53396 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.67□□□□□ -1.82
ACLYP53396 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.67□□□□□ -1.82
ACLYP53396 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.67□□□□□ -1.82
ACLYP53396 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.67□□□□□ -1.82
ACLYP53396 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.67□□□□□ -1.82
ACLYP53396 AC018618.2-201ENST00000604770 446 ntBASIC3.67□□□□□ -1.82
ACLYP53396 ATP5A1P2-202ENST00000616464 443 ntBASIC3.67□□□□□ -1.82
ACLYP53396 MIR6864-201ENST00000617935 70 ntBASIC3.67□□□□□ -1.82
ACLYP53396 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ACLYP53396 AL137790.1-201ENST00000634283 177 ntBASIC3.67□□□□□ -1.82
ACLYP53396 OR6C71P-202ENST00000641886 1107 ntBASIC3.67□□□□□ -1.82
ACLYP53396 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ACLYP53396 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ACLYP53396 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
ACLYP53396 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.67□□□□□ -1.82
ACLYP53396 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ACLYP53396 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 HSPA8P1-201ENST00000425843 1833 ntBASIC3.66□□□□□ -1.82
ACLYP53396 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 TAF9BP2-201ENST00000400856 499 ntBASIC3.66□□□□□ -1.82
ACLYP53396 RNU2-17P-201ENST00000410290 190 ntBASIC3.66□□□□□ -1.82
ACLYP53396 XKRYP4-201ENST00000414395 483 ntBASIC3.66□□□□□ -1.82
ACLYP53396 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ACLYP53396 MTND4P24-201ENST00000424002 397 ntBASIC3.66□□□□□ -1.82
ACLYP53396 RPL35AP12-201ENST00000425362 338 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
ACLYP53396 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.66□□□□□ -1.82
ACLYP53396 USP9YP7-201ENST00000436723 430 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC107083.1-201ENST00000439643 279 ntBASIC3.66□□□□□ -1.82
ACLYP53396 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.66□□□□□ -1.82
ACLYP53396 ATP5C1P1-201ENST00000441945 895 ntBASIC3.66□□□□□ -1.82
ACLYP53396 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.66□□□□□ -1.82
ACLYP53396 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 XKRYP5-201ENST00000449659 483 ntBASIC3.66□□□□□ -1.82
ACLYP53396 USP9YP32-201ENST00000452432 430 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 AC106872.2-201ENST00000494303 480 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.66□□□□□ -1.82
ACLYP53396 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.66□□□□□ -1.82
ACLYP53396 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 RN7SKP116-201ENST00000516902 319 ntBASIC3.66□□□□□ -1.82
ACLYP53396 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.66□□□□□ -1.82
ACLYP53396 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.66□□□□□ -1.82
ACLYP53396 AP002404.1-201ENST00000532005 451 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.66□□□□□ -1.82
ACLYP53396 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.66□□□□□ -1.82
ACLYP53396 AP005205.1-201ENST00000563503 508 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC022146.1-201ENST00000595307 847 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC079610.2-201ENST00000604818 690 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AL355802.4-201ENST00000607635 548 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.66□□□□□ -1.82
ACLYP53396 AL590240.3-201ENST00000621416 943 ntBASIC3.66□□□□□ -1.82
ACLYP53396 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.66□□□□□ -1.82
ACLYP53396 AC006065.5-201ENST00000623427 349 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC018692.3-201ENST00000623929 123 ntBASIC3.66□□□□□ -1.82
ACLYP53396 AC004943.3-201ENST00000624116 600 ntBASIC3.66□□□□□ -1.82
ACLYP53396 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ACLYP53396 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACLYP53396 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.82
ACLYP53396 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.65□□□□□ -1.82
ACLYP53396 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ACLYP53396 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ACLYP53396 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
ACLYP53396 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ACLYP53396 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ACLYP53396 SNORA5B-201ENST00000363786 132 ntBASIC3.65□□□□□ -1.83
ACLYP53396 SNORD51.1-201ENST00000365405 77 ntBASIC3.65□□□□□ -1.83
ACLYP53396 ARF4P3-201ENST00000397387 509 ntBASIC3.65□□□□□ -1.83
ACLYP53396 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
ACLYP53396 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.65□□□□□ -1.83
ACLYP53396 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.65□□□□□ -1.83
ACLYP53396 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.65□□□□□ -1.83
ACLYP53396 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.65□□□□□ -1.83
ACLYP53396 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.65□□□□□ -1.83
ACLYP53396 AC092685.1-201ENST00000447960 1243 ntBASIC3.65□□□□□ -1.83
ACLYP53396 AC010307.1-201ENST00000467206 836 ntBASIC3.65□□□□□ -1.83
ACLYP53396 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.65□□□□□ -1.83
ACLYP53396 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.65□□□□□ -1.83
ACLYP53396 BTF3L4P4-201ENST00000506381 449 ntBASIC3.65□□□□□ -1.83
ACLYP53396 AC005351.1-201ENST00000511152 786 ntBASIC3.65□□□□□ -1.83
ACLYP53396 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.65□□□□□ -1.83
ACLYP53396 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms