Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NEK3P51956 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NEK3P51956 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
NEK3P51956 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 AC008033.1-201ENST00000216407 1162 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AL161781.1-201ENST00000354277 403 ntBASIC4.72□□□□□ -1.65
NEK3P51956 RNA5SP258-201ENST00000362750 119 ntBASIC4.72□□□□□ -1.65
NEK3P51956 RN7SKP44-201ENST00000363602 316 ntBASIC4.72□□□□□ -1.65
NEK3P51956 RNU6-263P-201ENST00000363811 107 ntBASIC4.72□□□□□ -1.65
NEK3P51956 HDGFP1-201ENST00000405943 252 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC016397.1-201ENST00000412463 242 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.72□□□□□ -1.65
NEK3P51956 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.72□□□□□ -1.65
NEK3P51956 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.72□□□□□ -1.65
NEK3P51956 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 RNU7-125P-201ENST00000458760 62 ntBASIC4.72□□□□□ -1.65
NEK3P51956 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 AC111000.2-201ENST00000507775 550 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC005178.1-201ENST00000508392 440 ntBASIC4.72□□□□□ -1.65
NEK3P51956 STMN1P2-201ENST00000508435 439 ntBASIC4.72□□□□□ -1.65
NEK3P51956 LTV1P1-201ENST00000510683 1237 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC023141.12-201ENST00000512399 199 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.72□□□□□ -1.65
NEK3P51956 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.72□□□□□ -1.65
NEK3P51956 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
NEK3P51956 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.72□□□□□ -1.65
NEK3P51956 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.72□□□□□ -1.65
NEK3P51956 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 SETP7-201ENST00000552169 453 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.72□□□□□ -1.65
NEK3P51956 AC005255.1-201ENST00000593748 216 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC068790.4-201ENST00000602474 263 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC011816.2-201ENST00000607089 556 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AL023881.1-201ENST00000621088 301 ntBASIC4.72□□□□□ -1.65
NEK3P51956 AC009039.2-201ENST00000624524 529 ntBASIC4.72□□□□□ -1.65
NEK3P51956 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
NEK3P51956 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEK3P51956 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
NEK3P51956 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NEK3P51956 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.71□□□□□ -1.65
NEK3P51956 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.71□□□□□ -1.66
NEK3P51956 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
NEK3P51956 AL049780.3-201ENST00000624612 1583 ntBASIC4.71□□□□□ -1.66
NEK3P51956 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 RNU6-553P-201ENST00000364047 96 ntBASIC4.71□□□□□ -1.66
NEK3P51956 SNORD113.2-201ENST00000364166 89 ntBASIC4.71□□□□□ -1.66
NEK3P51956 RNU6-335P-201ENST00000364563 113 ntBASIC4.71□□□□□ -1.66
NEK3P51956 Z98745.1-201ENST00000402553 494 ntBASIC4.71□□□□□ -1.66
NEK3P51956 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NEK3P51956 AL583834.1-201ENST00000406943 343 ntBASIC4.71□□□□□ -1.66
NEK3P51956 MIR320C1-201ENST00000408566 88 ntBASIC4.71□□□□□ -1.66
NEK3P51956 RNU4-78P-201ENST00000410940 126 ntBASIC4.71□□□□□ -1.66
NEK3P51956 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.71□□□□□ -1.66
NEK3P51956 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.71□□□□□ -1.66
NEK3P51956 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NEK3P51956 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.71□□□□□ -1.66
NEK3P51956 AC068287.1-201ENST00000430283 295 ntBASIC4.71□□□□□ -1.66
NEK3P51956 MTND1P20-201ENST00000430341 950 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 ARL2BPP10-201ENST00000446487 531 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC002381.1-201ENST00000447049 280 ntBASIC4.71□□□□□ -1.66
NEK3P51956 MTCO1P27-201ENST00000448269 226 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AL162591.2-201ENST00000449634 317 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC009220.1-201ENST00000451614 275 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.71□□□□□ -1.66
NEK3P51956 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 BX322784.1-201ENST00000455793 1077 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AP000873.1-201ENST00000463987 400 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC090142.1-201ENST00000465776 462 ntBASIC4.71□□□□□ -1.66
NEK3P51956 NDUFA5P9-201ENST00000472609 340 ntBASIC4.71□□□□□ -1.66
NEK3P51956 RPL36AP41-201ENST00000493820 306 ntBASIC4.71□□□□□ -1.66
NEK3P51956 CEACAMP10-202ENST00000495431 496 ntBASIC4.71□□□□□ -1.66
NEK3P51956 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AK3P4-201ENST00000504283 583 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms