Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.92□□□□□ -1.46
USP11P51784 OR10G5P-201ENST00000532733 358 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 RN7SL290P-201ENST00000578661 300 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC011447.4-201ENST00000587562 111 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 AC004853.1-201ENST00000604902 698 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC021646.1-201ENST00000605469 484 ntBASIC5.92□□□□□ -1.46
USP11P51784 RNU6-87P-201ENST00000607561 108 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC118658.2-201ENST00000618697 459 ntBASIC5.92□□□□□ -1.46
USP11P51784 MIR6719-201ENST00000622428 87 ntBASIC5.92□□□□□ -1.46
USP11P51784 AC021106.3-201ENST00000623925 531 ntBASIC5.92□□□□□ -1.46
USP11P51784 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.92□□□□□ -1.46
USP11P51784 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 SAMMSON-213ENST00000641336 1521 ntBASIC5.92□□□□□ -1.46
USP11P51784 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USP11P51784 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
USP11P51784 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.92□□□□□ -1.46
USP11P51784 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.91□□□□□ -1.46
USP11P51784 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.91□□□□□ -1.46
USP11P51784 ERCC6-202ENST00000374127 1782 ntBASIC5.91□□□□□ -1.46
USP11P51784 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP11P51784 Y_RNA.133-201ENST00000363428 110 ntBASIC5.91□□□□□ -1.46
USP11P51784 RNU6-115P-201ENST00000364310 107 ntBASIC5.91□□□□□ -1.46
USP11P51784 Y_RNA.459-201ENST00000384251 102 ntBASIC5.91□□□□□ -1.46
USP11P51784 RNU6-43P-201ENST00000384302 107 ntBASIC5.91□□□□□ -1.46
USP11P51784 MIR105-2-201ENST00000385083 81 ntBASIC5.91□□□□□ -1.46
USP11P51784 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.91□□□□□ -1.46
USP11P51784 U3.36-201ENST00000408418 213 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC127391.1-201ENST00000411737 98 ntBASIC5.91□□□□□ -1.46
USP11P51784 MTND3P8-201ENST00000412909 339 ntBASIC5.91□□□□□ -1.46
USP11P51784 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.91□□□□□ -1.46
USP11P51784 RSU1P2-202ENST00000437884 485 ntBASIC5.91□□□□□ -1.46
USP11P51784 GAPDHP58-201ENST00000438477 1006 ntBASIC5.91□□□□□ -1.46
USP11P51784 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.91□□□□□ -1.46
USP11P51784 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 AC006480.1-201ENST00000449887 378 ntBASIC5.91□□□□□ -1.46
USP11P51784 Y_RNA.639-201ENST00000458981 102 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC090142.1-201ENST00000465776 462 ntBASIC5.91□□□□□ -1.46
USP11P51784 ST13P14-201ENST00000474095 734 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC013356.1-201ENST00000489027 564 ntBASIC5.91□□□□□ -1.46
USP11P51784 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.91□□□□□ -1.46
USP11P51784 AC016559.2-201ENST00000510759 359 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.91□□□□□ -1.46
USP11P51784 Y_RNA.691-201ENST00000516611 103 ntBASIC5.91□□□□□ -1.46
USP11P51784 PSMA2P1-201ENST00000526365 646 ntBASIC5.91□□□□□ -1.46
USP11P51784 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.91□□□□□ -1.46
USP11P51784 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.91□□□□□ -1.46
USP11P51784 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.91□□□□□ -1.46
USP11P51784 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.91□□□□□ -1.46
USP11P51784 AC009117.1-201ENST00000563948 554 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 AC006006.1-201ENST00000603082 144 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC104785.1-201ENST00000603220 588 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC211433.2-201ENST00000608433 387 ntBASIC5.91□□□□□ -1.46
USP11P51784 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 AL133173.2-201ENST00000614270 90 ntBASIC5.91□□□□□ -1.46
USP11P51784 AL132822.1-201ENST00000617063 513 ntBASIC5.91□□□□□ -1.46
USP11P51784 7SK.10-201ENST00000621414 298 ntBASIC5.91□□□□□ -1.46
USP11P51784 AC090617.10-201ENST00000624308 134 ntBASIC5.91□□□□□ -1.46
USP11P51784 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.91□□□□□ -1.46
USP11P51784 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 ASNSP1-204ENST00000641977 1664 ntBASIC5.91□□□□□ -1.46
USP11P51784 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.91□□□□□ -1.46
USP11P51784 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.91□□□□□ -1.46
USP11P51784 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP11P51784 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP11P51784 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USP11P51784 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP11P51784 AL118496.1-201ENST00000440201 1812 ntBASIC5.9□□□□□ -1.46
USP11P51784 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USP11P51784 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP11P51784 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USP11P51784 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.9□□□□□ -1.46
USP11P51784 RPL23P2-201ENST00000320371 421 ntBASIC5.9□□□□□ -1.46
USP11P51784 RPL7P26-201ENST00000333817 754 ntBASIC5.9□□□□□ -1.46
USP11P51784 MIR369-201ENST00000362155 70 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms