Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 MFSD8-236ENST00000641509 4050 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 ZNF285B-201ENST00000561698 1767 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCLP35914 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC046144.1-201ENST00000478559 1853 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCLP35914 RNA5SP124-201ENST00000362739 110 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 MIR1303-201ENST00000408625 86 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 RNU6-77P-201ENST00000410554 91 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 RPS7P9-201ENST00000414704 586 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 LIPT1P1-201ENST00000415870 1186 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC122718.1-201ENST00000439448 744 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 PTGES3P1-201ENST00000439531 483 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC004854.1-201ENST00000440356 349 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 DNAJC19P8-201ENST00000452887 259 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 FAM133DP-201ENST00000464802 691 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 OR5H4P-201ENST00000510851 923 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC023141.12-201ENST00000512399 199 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGCLP35914 RN7SKP18-201ENST00000516005 275 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 RNU6-1028P-201ENST00000517164 93 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 RNU1-45P-201ENST00000517191 141 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC087897.1-201ENST00000550134 156 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 ZNF192P1-203ENST00000565888 810 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC023824.3-201ENST00000569003 562 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 MTCO1P40-201ENST00000574371 625 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.6□□□□□ -1.83
HMGCLP35914 NF1P5-201ENST00000588287 448 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC115085.1-201ENST00000588924 229 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC006077.1-201ENST00000604746 343 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC026790.2-201ENST00000606282 430 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 VN1R7P-201ENST00000619242 903 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC091046.2-201ENST00000620775 665 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC039056.2-201ENST00000622261 511 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AL356863.1-201ENST00000623378 1080 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC034229.5-201ENST00000624258 185 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC116563.2-201ENST00000624751 535 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 CR392039.4-201ENST00000624968 501 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 MIR4278-201ENST00000636094 69 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC099654.9-201ENST00000637055 678 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC013437.2-201ENST00000639587 677 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC119674.1-207ENST00000641355 633 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 AC139713.2-210ENST00000641741 992 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HMGCLP35914 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGCLP35914 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
HMGCLP35914 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
HMGCLP35914 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCLP35914 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCLP35914 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCLP35914 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCLP35914 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCLP35914 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 SNORA5A-201ENST00000384111 134 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 MTCO1P56-201ENST00000401674 224 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 MTATP6P31-201ENST00000406985 692 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 U3.39-201ENST00000408569 239 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 AC127526.1-201ENST00000417526 366 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 SYF2P2-201ENST00000417620 583 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGCLP35914 AL009174.1-201ENST00000426577 416 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGCLP35914 USP9YP31-201ENST00000431405 881 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 AC011242.1-201ENST00000433596 1158 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 MRPS18BP2-201ENST00000434310 759 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGCLP35914 RPS26P30-201ENST00000443431 335 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 AL358794.1-201ENST00000445689 381 ntBASIC3.59□□□□□ -1.83
HMGCLP35914 MTND1P33-201ENST00000446251 917 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms