Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR7-3-201ENST00000384898 110 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC004987.3-201ENST00000413879 771 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 LIPT1P1-201ENST00000415870 1186 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 DBIP2-201ENST00000419076 262 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 AL158053.1-201ENST00000441503 453 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 MTND1P33-201ENST00000446251 917 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.41□□□□□ -1.86
SHMT2P34897 RBMY2UP-201ENST00000453474 324 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 RPS4XP2-201ENST00000458402 793 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC015724.1-201ENST00000478577 156 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC008885.2-201ENST00000509506 930 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 MTCO1P30-201ENST00000515244 580 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 RNU6-334P-201ENST00000517072 102 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 DUXAP2-201ENST00000519198 589 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC113192.3-201ENST00000529152 742 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.41□□□□□ -1.86
SHMT2P34897 AL442163.2-201ENST00000553912 710 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 ZNF192P1-203ENST00000565888 810 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 MTND4LP25-201ENST00000570218 163 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC124283.4-201ENST00000581815 456 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.41□□□□□ -1.86
SHMT2P34897 AP003117.2-201ENST00000606010 545 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 U4.6-201ENST00000621618 127 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHMT2P34897 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SHMT2P34897 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SHMT2P34897 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
SHMT2P34897 NSRP1P1-201ENST00000444067 1693 ntBASIC3.4□□□□□ -1.86
SHMT2P34897 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHMT2P34897 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHMT2P34897 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHMT2P34897 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 RNU6-954P-201ENST00000411355 107 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AC069218.2-201ENST00000411665 344 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.4□□□□□ -1.87
SHMT2P34897 CRYBB2P1-203ENST00000415709 538 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AL389915.1-201ENST00000422463 466 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.4□□□□□ -1.87
SHMT2P34897 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 UBE2V1P5-201ENST00000440070 405 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHMT2P34897 RPL6P5-201ENST00000445678 828 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AL096803.2-201ENST00000450032 677 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AC008280.2-201ENST00000455473 307 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 GTF2IP12-201ENST00000456547 356 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 CFTRP1-201ENST00000456646 183 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 HMGB3P30-201ENST00000457863 606 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.4□□□□□ -1.87
SHMT2P34897 AC008379.1-201ENST00000463655 464 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 RPL6P9-201ENST00000466502 859 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AP000893.1-201ENST00000474462 794 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 SETP14-201ENST00000497538 873 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 AC104108.1-201ENST00000509930 412 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.87
SHMT2P34897 AP006245.1-201ENST00000522549 120 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.4□□□□□ -1.87
SHMT2P34897 AC093510.2-201ENST00000562820 896 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AC095057.3-201ENST00000567102 1157 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.4□□□□□ -1.87
SHMT2P34897 MIR3922-201ENST00000585192 84 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 AC019176.2-201ENST00000611579 315 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 AL392048.1-201ENST00000613946 534 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 AL392088.2-201ENST00000637607 285 ntBASIC3.4□□□□□ -1.87
SHMT2P34897 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.4□□□□□ -1.87
SHMT2P34897 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHMT2P34897 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
SHMT2P34897 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms