Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A5P29400 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
COL4A5P29400 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL4A5P29400 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A5P29400 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.28□□□□□ -1.88
COL4A5P29400 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.28□□□□□ -1.88
COL4A5P29400 BX276092.3-201ENST00000424182 230 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 ISCA1P6-201ENST00000427740 390 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.28□□□□□ -1.88
COL4A5P29400 B3GNT2P1-201ENST00000434960 952 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.28□□□□□ -1.88
COL4A5P29400 OR5H5P-201ENST00000503164 928 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
COL4A5P29400 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL4A5P29400 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.28□□□□□ -1.88
COL4A5P29400 AC009039.2-201ENST00000624524 529 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 AC073869.7-201ENST00000640874 297 ntBASIC3.28□□□□□ -1.88
COL4A5P29400 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A5P29400 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A5P29400 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
COL4A5P29400 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A5P29400 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.89
COL4A5P29400 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A5P29400 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.27□□□□□ -1.89
COL4A5P29400 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 U8.2-201ENST00000363156 134 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 ATF1P1-201ENST00000406040 927 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RANP7-201ENST00000418085 644 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AC132942.1-201ENST00000486753 483 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AC112184.1-201ENST00000505179 312 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AC021733.2-201ENST00000518830 497 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 IGLVIV-53-201ENST00000520107 367 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 AL365503.1-201ENST00000605247 905 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AL356274.1-201ENST00000617064 410 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 PROS2P-201ENST00000474651 1951 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL4A5P29400 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL4A5P29400 AC107081.3-201ENST00000612715 2034 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
COL4A5P29400 SNORA46-201ENST00000384762 135 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RN7SKP223-201ENST00000410582 62 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RPS7P13-201ENST00000413955 498 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 GTF2IP23-201ENST00000423746 351 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 RPS20P5-201ENST00000434808 360 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A5P29400 AC104058.1-201ENST00000448028 297 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 SNRPGP5-201ENST00000456003 220 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 AC091544.1-201ENST00000484702 348 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 RN7SKP31-201ENST00000516354 278 ntBASIC3.27□□□□□ -1.89
COL4A5P29400 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A5P29400 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.27□□□□□ -1.89
COL4A5P29400 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL4A5P29400 RNU1-35P-201ENST00000362782 153 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL4A5P29400 GCNT6-201ENST00000379591 934 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 RNA5SP274-201ENST00000410484 108 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A5P29400 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A5P29400 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A5P29400 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.26□□□□□ -1.89
COL4A5P29400 RPL7P20-201ENST00000520308 745 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 AP000873.5-201ENST00000533906 236 ntBASIC3.26□□□□□ -1.89
COL4A5P29400 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A5P29400 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A5P29400 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A5P29400 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A5P29400 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.26□□□□□ -1.89
COL4A5P29400 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A5P29400 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A5P29400 AC093909.5-201ENST00000621839 1799 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A5P29400 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A5P29400 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A5P29400 FAM133CP-201ENST00000332869 704 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 ATP5F1P6-201ENST00000402768 767 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 RPS12P23-201ENST00000419579 400 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.25□□□□□ -1.89
COL4A5P29400 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.25□□□□□ -1.89
COL4A5P29400 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.25□□□□□ -1.89
COL4A5P29400 snoU13.23-201ENST00000458863 104 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 RPL21P41-201ENST00000459863 264 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 AC018797.3-201ENST00000513388 1241 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.25□□□□□ -1.89
COL4A5P29400 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 AC241585.2-209ENST00000638217 143 ntBASIC3.25□□□□□ -1.89
COL4A5P29400 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A5P29400 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL4A5P29400 MIR512-1-201ENST00000384913 84 ntBASIC3.24□□□□□ -1.89
COL4A5P29400 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
COL4A5P29400 AC127526.1-201ENST00000417526 366 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms