Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC019226.2-201ENST00000625973 424 ntBASIC4.15□□□□□ -1.75
ABCD3P28288 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ABCD3P28288 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ABCD3P28288 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.15□□□□□ -1.75
ABCD3P28288 AC139769.1-204ENST00000472297 1931 ntBASIC4.15□□□□□ -1.75
ABCD3P28288 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.14□□□□□ -1.75
ABCD3P28288 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ABCD3P28288 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.14□□□□□ -1.75
ABCD3P28288 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
ABCD3P28288 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 RNU6-28P-201ENST00000362378 107 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RNA5SP443-201ENST00000363083 132 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RNU6-1249P-201ENST00000363237 111 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RNA5SP167-201ENST00000365461 116 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ABCD3P28288 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RNU6-952P-201ENST00000391164 108 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RPS15AP38-201ENST00000413110 372 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC093698.1-201ENST00000423843 571 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 SDCBPP1-201ENST00000440192 890 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 HMGB1P15-201ENST00000453854 435 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RPS20P32-201ENST00000456044 356 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 snoU13.1-201ENST00000459157 104 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC010469.1-201ENST00000463864 576 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 HMGB1P25-201ENST00000468402 607 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 RPL21P126-201ENST00000470049 478 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC024589.1-201ENST00000512207 263 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 AP004371.1-201ENST00000525240 214 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 OR7K1P-201ENST00000546439 926 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC068790.4-201ENST00000602474 263 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 BBIP1P1-201ENST00000602999 279 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC008745.1-201ENST00000604064 271 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC020634.1-201ENST00000608701 549 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC012409.3-201ENST00000611343 981 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.14□□□□□ -1.75
ABCD3P28288 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.14□□□□□ -1.75
ABCD3P28288 AL596245.1-201ENST00000618994 362 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 C2orf27A-204ENST00000623058 969 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 AC091905.2-201ENST00000623143 306 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.14□□□□□ -1.75
ABCD3P28288 AC138649.5-201ENST00000637456 137 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 NXPH1-205ENST00000602349 1953 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.14□□□□□ -1.75
ABCD3P28288 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.14□□□□□ -1.75
ABCD3P28288 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ABCD3P28288 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
ABCD3P28288 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.13□□□□□ -1.75
ABCD3P28288 AL157700.1-201ENST00000561973 1432 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.13□□□□□ -1.75
ABCD3P28288 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ABCD3P28288 AL365440.1-201ENST00000436135 2167 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ABCD3P28288 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ABCD3P28288 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.13□□□□□ -1.75
ABCD3P28288 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
ABCD3P28288 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ABCD3P28288 RPL21P132-201ENST00000331267 462 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 RNU1-63P-201ENST00000383902 164 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ABCD3P28288 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 VN1R8P-201ENST00000407739 893 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.13□□□□□ -1.75
ABCD3P28288 MFSD13B-201ENST00000420133 1290 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 PTP4A1P5-201ENST00000420305 455 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.13□□□□□ -1.75
ABCD3P28288 RPS27AP7-201ENST00000422792 455 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC007742.1-201ENST00000425789 329 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC234781.2-201ENST00000426370 994 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC068287.1-201ENST00000430283 295 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 RPL23AP25-201ENST00000430973 463 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.13□□□□□ -1.75
ABCD3P28288 ELOCP26-201ENST00000436067 329 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 UBE2FP3-201ENST00000436366 524 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 MTND5P14-201ENST00000441481 1267 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.13□□□□□ -1.75
ABCD3P28288 EEF1E1P1-201ENST00000446998 430 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.13□□□□□ -1.75
ABCD3P28288 PAXBP1P1-201ENST00000449315 447 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.13□□□□□ -1.75
ABCD3P28288 ST13P14-201ENST00000474095 734 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 RPL23AP65-201ENST00000475608 468 ntBASIC4.13□□□□□ -1.75
ABCD3P28288 AC104563.1-201ENST00000476147 376 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms