Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
GDF1P27539 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GDF1P27539 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
GDF1P27539 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
GDF1P27539 ANKRD36P1-201ENST00000344424 659 ntBASIC3.38□□□□□ -1.87
GDF1P27539 RNA5SP167-201ENST00000365461 116 ntBASIC3.38□□□□□ -1.87
GDF1P27539 OR1L1-202ENST00000373686 1083 ntBASIC3.38□□□□□ -1.87
GDF1P27539 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
GDF1P27539 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 MIR525-201ENST00000384978 85 ntBASIC3.38□□□□□ -1.87
GDF1P27539 RNU2-65P-201ENST00000410162 185 ntBASIC3.38□□□□□ -1.87
GDF1P27539 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 AL389915.1-201ENST00000422463 466 ntBASIC3.38□□□□□ -1.87
GDF1P27539 NANOGP5-201ENST00000424456 877 ntBASIC3.38□□□□□ -1.87
GDF1P27539 HIGD1AP12-201ENST00000427832 281 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.38□□□□□ -1.87
GDF1P27539 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.38□□□□□ -1.87
GDF1P27539 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.38□□□□□ -1.87
GDF1P27539 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
GDF1P27539 RPL37P3-201ENST00000456825 293 ntBASIC3.38□□□□□ -1.87
GDF1P27539 CEACAMP4-201ENST00000457676 421 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC134050.1-201ENST00000495088 933 ntBASIC3.38□□□□□ -1.87
GDF1P27539 NIPA2P2-201ENST00000496376 1083 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.38□□□□□ -1.87
GDF1P27539 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.38□□□□□ -1.87
GDF1P27539 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.38□□□□□ -1.87
GDF1P27539 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.38□□□□□ -1.87
GDF1P27539 RN7SKP18-201ENST00000516005 275 ntBASIC3.38□□□□□ -1.87
GDF1P27539 SUMO2P20-201ENST00000520803 283 ntBASIC3.38□□□□□ -1.87
GDF1P27539 OR10V3P-201ENST00000525712 725 ntBASIC3.38□□□□□ -1.87
GDF1P27539 MTND1P24-201ENST00000552175 861 ntBASIC3.38□□□□□ -1.87
GDF1P27539 GTF2IP22-201ENST00000554443 182 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC074050.1-201ENST00000563247 211 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC090312.2-201ENST00000582687 378 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 NF1P5-201ENST00000588287 448 ntBASIC3.38□□□□□ -1.87
GDF1P27539 BNIP3P33-201ENST00000598912 569 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AL020997.3-201ENST00000602843 359 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC002487.1-201ENST00000604565 994 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC106052.1-201ENST00000608029 497 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
GDF1P27539 PART1_2.1-201ENST00000612397 250 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AL121895.2-201ENST00000619558 447 ntBASIC3.38□□□□□ -1.87
GDF1P27539 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.38□□□□□ -1.87
GDF1P27539 AC008993.2-201ENST00000631744 806 ntBASIC3.38□□□□□ -1.87
GDF1P27539 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.38□□□□□ -1.87
GDF1P27539 OR8B1P-202ENST00000641132 1178 ntBASIC3.38□□□□□ -1.87
GDF1P27539 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.38□□□□□ -1.87
GDF1P27539 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
GDF1P27539 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.38□□□□□ -1.87
GDF1P27539 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 AC025263.3-201ENST00000622965 1396 ntBASIC3.38□□□□□ -1.87
GDF1P27539 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
GDF1P27539 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GDF1P27539 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GDF1P27539 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
GDF1P27539 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GDF1P27539 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GDF1P27539 MIR423-201ENST00000362201 94 ntBASIC3.37□□□□□ -1.87
GDF1P27539 RNU4-51P-201ENST00000364206 140 ntBASIC3.37□□□□□ -1.87
GDF1P27539 SNORD6-201ENST00000365444 73 ntBASIC3.37□□□□□ -1.87
GDF1P27539 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GDF1P27539 Y_RNA.472-201ENST00000384322 102 ntBASIC3.37□□□□□ -1.87
GDF1P27539 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
GDF1P27539 RNU4-22P-201ENST00000411058 166 ntBASIC3.37□□□□□ -1.87
GDF1P27539 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.37□□□□□ -1.87
GDF1P27539 PRELID3BP11-201ENST00000414230 479 ntBASIC3.37□□□□□ -1.87
GDF1P27539 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.37□□□□□ -1.87
GDF1P27539 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.37□□□□□ -1.87
GDF1P27539 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.37□□□□□ -1.87
GDF1P27539 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.37□□□□□ -1.87
GDF1P27539 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.37□□□□□ -1.87
GDF1P27539 MTCYBP42-201ENST00000444653 1130 ntBASIC3.37□□□□□ -1.87
GDF1P27539 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.37□□□□□ -1.87
GDF1P27539 UBDP1-202ENST00000457888 382 ntBASIC3.37□□□□□ -1.87
GDF1P27539 NAP1L1P3-201ENST00000462291 880 ntBASIC3.37□□□□□ -1.87
GDF1P27539 AC104689.1-201ENST00000473356 768 ntBASIC3.37□□□□□ -1.87
GDF1P27539 TRBV12-2-201ENST00000489763 344 ntBASIC3.37□□□□□ -1.87
GDF1P27539 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.37□□□□□ -1.87
GDF1P27539 AC104619.4-201ENST00000510773 249 ntBASIC3.37□□□□□ -1.87
GDF1P27539 OR5H4P-201ENST00000510851 923 ntBASIC3.37□□□□□ -1.87
GDF1P27539 RNA5SP143-201ENST00000516936 115 ntBASIC3.37□□□□□ -1.87
GDF1P27539 snoZ278.1-201ENST00000517059 112 ntBASIC3.37□□□□□ -1.87
GDF1P27539 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.37□□□□□ -1.87
GDF1P27539 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.37□□□□□ -1.87
GDF1P27539 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
GDF1P27539 MTCO3P15-201ENST00000526563 574 ntBASIC3.37□□□□□ -1.87
GDF1P27539 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GDF1P27539 DEFB130C-202ENST00000530001 230 ntBASIC3.37□□□□□ -1.87
GDF1P27539 AL121766.1-201ENST00000547436 487 ntBASIC3.37□□□□□ -1.87
GDF1P27539 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.37□□□□□ -1.87
GDF1P27539 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.37□□□□□ -1.87
GDF1P27539 AC006960.3-201ENST00000561845 705 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms