Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL163193.1-201ENST00000444895 788 ntBASIC6.38□□□□□ -1.39
RFX1P22670 GEMIN8P3-201ENST00000445417 720 ntBASIC6.38□□□□□ -1.39
RFX1P22670 RPS17P13-201ENST00000448974 407 ntBASIC6.38□□□□□ -1.39
RFX1P22670 FRG2FP-204ENST00000453982 852 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 AC007547.1-201ENST00000462177 490 ntBASIC6.38□□□□□ -1.39
RFX1P22670 RPL7L1P8-201ENST00000469911 741 ntBASIC6.38□□□□□ -1.39
RFX1P22670 ST13P14-201ENST00000474095 734 ntBASIC6.38□□□□□ -1.39
RFX1P22670 UBA52P7-201ENST00000486088 380 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AC116562.3-201ENST00000506136 177 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AC017037.2-201ENST00000513850 890 ntBASIC6.38□□□□□ -1.39
RFX1P22670 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 Y_RNA.691-201ENST00000516611 103 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AC068587.5-201ENST00000528506 175 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX1P22670 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX1P22670 MIR4742-201ENST00000581069 85 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AC060780.2-201ENST00000589047 198 ntBASIC6.38□□□□□ -1.39
RFX1P22670 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 SUMO2P15-201ENST00000604285 278 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AL451044.1-201ENST00000604867 238 ntBASIC6.38□□□□□ -1.39
RFX1P22670 NANOGP3-201ENST00000605855 286 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.38□□□□□ -1.39
RFX1P22670 AL136131.3-201ENST00000607600 188 ntBASIC6.38□□□□□ -1.39
RFX1P22670 MIR6719-201ENST00000622428 87 ntBASIC6.38□□□□□ -1.39
RFX1P22670 C2orf27A-204ENST00000623058 969 ntBASIC6.38□□□□□ -1.39
RFX1P22670 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 MIR4496-201ENST00000635896 61 ntBASIC6.38□□□□□ -1.39
RFX1P22670 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
RFX1P22670 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RFX1P22670 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX1P22670 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX1P22670 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX1P22670 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFX1P22670 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 PABPC1P7-201ENST00000413177 1513 ntBASIC6.37□□□□□ -1.39
RFX1P22670 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 MIR1203-201ENST00000408812 85 ntBASIC6.37□□□□□ -1.39
RFX1P22670 RNU2-39P-201ENST00000410604 198 ntBASIC6.37□□□□□ -1.39
RFX1P22670 RPL35AP3-201ENST00000414680 288 ntBASIC6.37□□□□□ -1.39
RFX1P22670 RPS4XP5-201ENST00000419038 768 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 NDUFA5P4-201ENST00000436704 385 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 RNU6-329P-201ENST00000459618 107 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC053481.1-201ENST00000467217 306 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC007537.2-201ENST00000472093 511 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC016559.2-201ENST00000510759 359 ntBASIC6.37□□□□□ -1.39
RFX1P22670 SNORD116-26-201ENST00000516006 96 ntBASIC6.37□□□□□ -1.39
RFX1P22670 RNU4-49P-201ENST00000516080 140 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC078899.1-201ENST00000521432 1185 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AP005435.4-201ENST00000529514 284 ntBASIC6.37□□□□□ -1.39
RFX1P22670 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFX1P22670 AP003072.1-201ENST00000531740 145 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.37□□□□□ -1.39
RFX1P22670 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX1P22670 COX6CP7-201ENST00000597056 208 ntBASIC6.37□□□□□ -1.39
RFX1P22670 FAM27E4-201ENST00000605259 342 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 AL603758.1-201ENST00000618654 241 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX1P22670 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 AL691477.1-201ENST00000624398 162 ntBASIC6.37□□□□□ -1.39
RFX1P22670 AP000843.1-201ENST00000624880 701 ntBASIC6.37□□□□□ -1.39
RFX1P22670 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX1P22670 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX1P22670 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 AC009962.1-201ENST00000567327 3813 ntBASIC6.37□□□□□ -1.39
RFX1P22670 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFX1P22670 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
RFX1P22670 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX1P22670 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX1P22670 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms