Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 RPL23AP56-201ENST00000460778 453 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AC087312.1-201ENST00000471411 480 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 RPS29P25-201ENST00000481709 171 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 NIP7P2-201ENST00000485801 544 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.08□□□□□ -1.44
LMNB1P20700 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.08□□□□□ -1.44
LMNB1P20700 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 RPS27AP18-201ENST00000515536 459 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 RNU6-347P-201ENST00000516658 105 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 GLYCAM1-201ENST00000546596 285 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.08□□□□□ -1.44
LMNB1P20700 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 ANP32BP3-201ENST00000559213 706 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AL157394.1-201ENST00000562983 1224 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.08□□□□□ -1.44
LMNB1P20700 MIR4637-201ENST00000582405 84 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 CR381572.2-201ENST00000624852 397 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AC083843.2-201ENST00000568248 6253 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.08□□□□□ -1.44
LMNB1P20700 AC009951.1-201ENST00000623674 2614 ntBASIC6.08□□□□□ -1.44
LMNB1P20700 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LMNB1P20700 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 ZNF652P1-201ENST00000442420 1309 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LMNB1P20700 RNU1-64P-201ENST00000365443 163 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 RNU6-444P-201ENST00000383988 108 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 MIR589-201ENST00000385238 99 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 RNU6-952P-201ENST00000391164 108 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 MIR1305-201ENST00000408300 86 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.07□□□□□ -1.44
LMNB1P20700 RAD23BP1-201ENST00000421404 1227 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AL354766.1-201ENST00000423396 542 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.07□□□□□ -1.44
LMNB1P20700 TIMM9P3-201ENST00000428659 274 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 RPS27AP12-201ENST00000429552 465 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.07□□□□□ -1.44
LMNB1P20700 MTND5P14-201ENST00000441481 1267 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.07□□□□□ -1.44
LMNB1P20700 TDGF1P1-201ENST00000445734 527 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 NOP56P2-201ENST00000447491 769 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 ELOCP23-201ENST00000452014 332 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC022034.3-201ENST00000471393 478 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 RNF138P1-201ENST00000502765 546 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 OR5H5P-201ENST00000503164 928 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC022447.3-201ENST00000506865 495 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 MTCO1P35-201ENST00000515270 228 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.07□□□□□ -1.44
LMNB1P20700 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 AC109635.3-201ENST00000529536 185 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.07□□□□□ -1.44
LMNB1P20700 AL390334.1-201ENST00000556395 450 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 MIR3939-201ENST00000582614 106 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC008752.3-201ENST00000588113 712 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC060780.3-201ENST00000589464 80 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AC243654.2-201ENST00000612843 443 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 MIR6133-201ENST00000617057 108 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AP001005.3-201ENST00000622049 129 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.07□□□□□ -1.44
LMNB1P20700 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.07□□□□□ -1.44
LMNB1P20700 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 AC083899.1-201ENST00000454465 3819 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 AL592148.3-201ENST00000608771 2646 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 AL022578.1-201ENST00000439330 1433 ntBASIC6.07□□□□□ -1.44
LMNB1P20700 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
LMNB1P20700 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LMNB1P20700 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LMNB1P20700 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.06□□□□□ -1.44
LMNB1P20700 HSPA8P17-201ENST00000427029 1382 ntBASIC6.06□□□□□ -1.44
LMNB1P20700 TRIM51GP-201ENST00000534741 1350 ntBASIC6.06□□□□□ -1.44
LMNB1P20700 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
LMNB1P20700 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LMNB1P20700 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 AC092681.1-201ENST00000297369 291 ntBASIC6.06□□□□□ -1.44
LMNB1P20700 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LMNB1P20700 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LMNB1P20700 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms