Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL359385.1-201ENST00000456509 365 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.1□□□□□ -1.43
ERCC3P19447 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.1□□□□□ -1.43
ERCC3P19447 SNORD125-201ENST00000459538 96 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 RPS3AP41-201ENST00000462701 778 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 ST13P14-201ENST00000474095 734 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC083982.1-201ENST00000485679 344 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 NIP7P2-201ENST00000485801 544 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC023194.1-201ENST00000493084 308 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.1□□□□□ -1.43
ERCC3P19447 AC116353.2-201ENST00000505332 712 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC108043.1-201ENST00000512696 574 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 BRD9P1-201ENST00000529855 560 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 HIGD1AP5-201ENST00000529959 259 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.1□□□□□ -1.43
ERCC3P19447 OR5AN2P-201ENST00000534535 896 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.1□□□□□ -1.43
ERCC3P19447 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 AC012507.3-201ENST00000603556 477 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC131238.1-201ENST00000617135 328 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 U73479.1-201ENST00000618062 168 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AP003400.3-201ENST00000624904 346 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.1□□□□□ -1.43
ERCC3P19447 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 PABPC1P7-201ENST00000413177 1513 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC3P19447 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC3P19447 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ERCC3P19447 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC3P19447 OR4K15-201ENST00000305051 1216 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 SNURFL-201ENST00000309296 343 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 RNU6-181P-201ENST00000363225 107 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 Y_RNA.256-201ENST00000364594 104 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 SNORA70.6-201ENST00000383934 134 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 MIR600-201ENST00000385007 98 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 RNU6-780P-201ENST00000391030 104 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.09□□□□□ -1.43
ERCC3P19447 AL391219.1-201ENST00000422570 483 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC007283.2-201ENST00000424739 197 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC3P19447 AL136380.1-201ENST00000447970 162 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 TPT1P13-201ENST00000449760 499 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 snoU13.20-201ENST00000459180 104 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 RPL38P1-201ENST00000460914 211 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AP000942.1-201ENST00000463969 747 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 PRDX4P1-201ENST00000507189 574 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC3P19447 RN7SKP116-201ENST00000516902 319 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 RNU6-445P-201ENST00000516949 107 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC107934.1-201ENST00000522215 217 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC100784.1-201ENST00000522790 310 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ERCC3P19447 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.09□□□□□ -1.43
ERCC3P19447 SUB1P2-201ENST00000556401 297 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC009117.1-201ENST00000563948 554 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC107954.1-201ENST00000565906 727 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 MIR548S-201ENST00000581352 82 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 RN7SL356P-201ENST00000582228 248 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC3P19447 AC073091.2-201ENST00000603205 907 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC009597.2-201ENST00000604659 592 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AL162431.4-201ENST00000604674 411 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC087783.2-201ENST00000605070 562 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 AC093799.2-201ENST00000610062 578 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC3P19447 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC3P19447 BMS1P21-201ENST00000634565 365 ntBASIC6.09□□□□□ -1.43
ERCC3P19447 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERCC3P19447 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC3P19447 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
ERCC3P19447 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.09□□□□□ -1.44
ERCC3P19447 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.09□□□□□ -1.44
ERCC3P19447 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ERCC3P19447 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ERCC3P19447 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 AC010928.1-201ENST00000592477 1447 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC3P19447 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
ERCC3P19447 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ERCC3P19447 RNU6-282P-201ENST00000365357 103 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ERCC3P19447 SNORA70E-201ENST00000384492 135 ntBASIC6.08□□□□□ -1.44
ERCC3P19447 RNU6-456P-201ENST00000384493 107 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms