Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH1P12830 RPS20P1-201ENST00000434853 354 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH1P12830 AC004865.1-201ENST00000442276 1003 ntBASIC4.01□□□□□ -1.77
CDH1P12830 MTND1P29-201ENST00000448112 647 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL034418.1-201ENST00000448675 860 ntBASIC4.01□□□□□ -1.77
CDH1P12830 NDUFS5P3-201ENST00000450668 321 ntBASIC4.01□□□□□ -1.77
CDH1P12830 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH1P12830 RPL12P26-201ENST00000452430 487 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH1P12830 TPTE2P5-203ENST00000458118 728 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH1P12830 AC104689.1-201ENST00000473356 768 ntBASIC4.01□□□□□ -1.77
CDH1P12830 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH1P12830 AC147055.4-201ENST00000504399 745 ntBASIC4.01□□□□□ -1.77
CDH1P12830 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH1P12830 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH1P12830 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH1P12830 MTCYBP33-201ENST00000575007 1130 ntBASIC4.01□□□□□ -1.77
CDH1P12830 ISCA1P3-201ENST00000577104 373 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH1P12830 AC146944.4-201ENST00000602697 718 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC010738.1-201ENST00000604970 987 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC010200.2-201ENST00000605098 235 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC105129.3-201ENST00000605455 485 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AC005962.2-201ENST00000611427 652 ntBASIC4.01□□□□□ -1.77
CDH1P12830 AL445567.2-201ENST00000618935 498 ntBASIC4.01□□□□□ -1.77
CDH1P12830 CR392039.4-201ENST00000624968 501 ntBASIC4.01□□□□□ -1.77
CDH1P12830 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH1P12830 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH1P12830 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH1P12830 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH1P12830 AC010329.2-201ENST00000595195 2737 ntBASIC4.01□□□□□ -1.77
CDH1P12830 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH1P12830 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4□□□□□ -1.77
CDH1P12830 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH1P12830 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
CDH1P12830 ELL2P3-201ENST00000457883 1602 ntBASIC4□□□□□ -1.77
CDH1P12830 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CDH1P12830 RNU6-1066P-201ENST00000363573 105 ntBASIC4□□□□□ -1.77
CDH1P12830 Y_RNA.311-201ENST00000365068 96 ntBASIC4□□□□□ -1.77
CDH1P12830 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 TMSB4XP8-201ENST00000402089 135 ntBASIC4□□□□□ -1.77
CDH1P12830 TMSB4XP6-201ENST00000415187 135 ntBASIC4□□□□□ -1.77
CDH1P12830 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 AC093698.1-201ENST00000423843 571 ntBASIC4□□□□□ -1.77
CDH1P12830 TMSB4XP1-201ENST00000424567 135 ntBASIC4□□□□□ -1.77
CDH1P12830 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 RPS26P40-201ENST00000435209 294 ntBASIC4□□□□□ -1.77
CDH1P12830 ELOCP10-201ENST00000440624 327 ntBASIC4□□□□□ -1.77
CDH1P12830 AL591503.2-201ENST00000442314 1005 ntBASIC4□□□□□ -1.77
CDH1P12830 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
CDH1P12830 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 RNA5SP246-201ENST00000458909 119 ntBASIC4□□□□□ -1.77
CDH1P12830 RPL21P71-201ENST00000465598 459 ntBASIC4□□□□□ -1.77
CDH1P12830 SYPL1P1-201ENST00000473622 768 ntBASIC4□□□□□ -1.77
CDH1P12830 RPS27AP13-201ENST00000498403 237 ntBASIC4□□□□□ -1.77
CDH1P12830 AC093824.1-201ENST00000508796 343 ntBASIC4□□□□□ -1.77
CDH1P12830 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH1P12830 AC117532.1-201ENST00000514638 323 ntBASIC4□□□□□ -1.77
CDH1P12830 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4□□□□□ -1.77
CDH1P12830 AP003730.1-201ENST00000524605 285 ntBASIC4□□□□□ -1.77
CDH1P12830 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4□□□□□ -1.77
CDH1P12830 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4□□□□□ -1.77
CDH1P12830 NBR2-204ENST00000587322 63 ntBASIC4□□□□□ -1.77
CDH1P12830 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4□□□□□ -1.77
CDH1P12830 AC006539.2-201ENST00000601729 572 ntBASIC4□□□□□ -1.77
CDH1P12830 ELOCP34-201ENST00000604436 327 ntBASIC4□□□□□ -1.77
CDH1P12830 CLPTM1LP1-201ENST00000604519 484 ntBASIC4□□□□□ -1.77
CDH1P12830 AL163642.2-201ENST00000604722 1019 ntBASIC4□□□□□ -1.77
CDH1P12830 OR2AS2P-201ENST00000606902 342 ntBASIC4□□□□□ -1.77
CDH1P12830 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4□□□□□ -1.77
CDH1P12830 AC004223.4-201ENST00000612426 332 ntBASIC4□□□□□ -1.77
CDH1P12830 MIR8059-201ENST00000620427 81 ntBASIC4□□□□□ -1.77
CDH1P12830 AC091965.5-201ENST00000624785 342 ntBASIC4□□□□□ -1.77
CDH1P12830 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH1P12830 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
CDH1P12830 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH1P12830 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH1P12830 DBF4P1-201ENST00000412976 1892 ntBASIC4□□□□□ -1.77
CDH1P12830 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
CDH1P12830 AL445523.1-201ENST00000451184 1362 ntBASIC4□□□□□ -1.77
CDH1P12830 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDH1P12830 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.99□□□□□ -1.77
CDH1P12830 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
CDH1P12830 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH1P12830 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH1P12830 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
CDH1P12830 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDH1P12830 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH1P12830 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDH1P12830 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms