Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.2□□□□□ -1.9
COL11A1P12107 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.2□□□□□ -1.9
COL11A1P12107 AC138761.3-201ENST00000579993 334 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.2□□□□□ -1.9
COL11A1P12107 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.2□□□□□ -1.9
COL11A1P12107 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL11A1P12107 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL11A1P12107 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
COL11A1P12107 ELF2P3-201ENST00000445099 1506 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.19□□□□□ -1.9
COL11A1P12107 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AL139413.1-201ENST00000421309 217 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AL035407.1-201ENST00000429211 571 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.19□□□□□ -1.9
COL11A1P12107 AC009097.3-201ENST00000563557 1018 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AP001005.3-201ENST00000622049 129 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL11A1P12107 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL11A1P12107 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.19□□□□□ -1.9
COL11A1P12107 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COL11A1P12107 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
COL11A1P12107 CACYBPP2-201ENST00000453625 678 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.19□□□□□ -1.9
COL11A1P12107 PRELID3BP7-201ENST00000503606 469 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 IGKV2D-23-201ENST00000518179 286 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.19□□□□□ -1.9
COL11A1P12107 AC007954.1-201ENST00000554198 494 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.19□□□□□ -1.9
COL11A1P12107 AC011492.1-201ENST00000600023 315 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AL035413.2-201ENST00000604801 525 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AC092628.2-201ENST00000622492 339 ntBASIC3.19□□□□□ -1.9
COL11A1P12107 AC107081.3-201ENST00000612715 2034 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.18□□□□□ -1.9
COL11A1P12107 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.18□□□□□ -1.9
COL11A1P12107 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL11A1P12107 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.18□□□□□ -1.9
COL11A1P12107 RNA5SP289-201ENST00000362332 137 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.18□□□□□ -1.9
COL11A1P12107 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.18□□□□□ -1.9
COL11A1P12107 PTP4A1P1-201ENST00000420539 515 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 AC073508.1-201ENST00000428866 656 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 BMS1P7-201ENST00000602440 1052 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 AC243829.7-201ENST00000633081 225 ntBASIC3.18□□□□□ -1.9
COL11A1P12107 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.18□□□□□ -1.9
COL11A1P12107 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.18□□□□□ -1.9
COL11A1P12107 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.18□□□□□ -1.9
COL11A1P12107 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL11A1P12107 SNORA67.4-201ENST00000384688 142 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 AL512430.2-201ENST00000406786 339 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 AC105402.2-201ENST00000438503 358 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 NPM1P13-201ENST00000452663 865 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.17□□□□□ -1.9
COL11A1P12107 RNU4-29P-201ENST00000515943 174 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.17□□□□□ -1.9
COL11A1P12107 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL11A1P12107 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 MIR4435-1-201ENST00000582552 80 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 MIR4769-201ENST00000584126 77 ntBASIC3.17□□□□□ -1.9
COL11A1P12107 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL11A1P12107 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
COL11A1P12107 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
COL11A1P12107 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.16□□□□□ -1.9
COL11A1P12107 RPL29P29-201ENST00000448725 423 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.16□□□□□ -1.9
COL11A1P12107 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL11A1P12107 OR5AK3P-201ENST00000527486 1297 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.16□□□□□ -1.9
COL11A1P12107 AC087468.1-201ENST00000604365 630 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
COL11A1P12107 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL11A1P12107 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.16□□□□□ -1.9
COL11A1P12107 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 AC073136.2-201ENST00000417282 849 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.16□□□□□ -1.9
COL11A1P12107 AC114781.4-201ENST00000513707 639 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.16□□□□□ -1.9
COL11A1P12107 FAM60DP-201ENST00000524174 632 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 AC243972.3-201ENST00000539655 198 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
COL11A1P12107 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
COL11A1P12107 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL11A1P12107 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL11A1P12107 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.15□□□□□ -1.9
COL11A1P12107 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL11A1P12107 AL672167.1-206ENST00000356293 943 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL11A1P12107 SNORA70B-201ENST00000384210 135 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms