Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.72□□□□□ -1.65
TOP2AP11388 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 AC092608.2-201ENST00000624427 218 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TOP2AP11388 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TOP2AP11388 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TOP2AP11388 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TOP2AP11388 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.72□□□□□ -1.65
TOP2AP11388 RN7SL75P-201ENST00000461926 281 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TOP2AP11388 AC096725.1-201ENST00000514266 313 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.72□□□□□ -1.65
TOP2AP11388 ATP5F1P7-201ENST00000567330 760 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.72□□□□□ -1.65
TOP2AP11388 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.72□□□□□ -1.65
TOP2AP11388 CTSLP2-204ENST00000629029 392 ntBASIC4.72□□□□□ -1.65
TOP2AP11388 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TOP2AP11388 RNU6-805P-201ENST00000365643 106 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.71□□□□□ -1.66
TOP2AP11388 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TOP2AP11388 AL583834.1-201ENST00000406943 343 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 HMGB3P23-201ENST00000414981 585 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.71□□□□□ -1.66
TOP2AP11388 RN7SL442P-201ENST00000473804 320 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 ANXA2P1-201ENST00000505539 926 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 UBTFL10-201ENST00000528532 562 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.71□□□□□ -1.66
TOP2AP11388 U7.8-201ENST00000619968 63 ntBASIC4.71□□□□□ -1.66
TOP2AP11388 AL365361.1-201ENST00000566942 3481 ntBASIC4.7□□□□□ -1.66
TOP2AP11388 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 AC093663.2-201ENST00000484625 313 ntBASIC4.7□□□□□ -1.66
TOP2AP11388 ZNF861P-201ENST00000588126 639 ntBASIC4.7□□□□□ -1.66
TOP2AP11388 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TOP2AP11388 RN7SKP192-201ENST00000411291 327 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 SMC4P1-201ENST00000414479 527 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 CACYBPP2-201ENST00000453625 678 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 AC008413.1-201ENST00000511864 177 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TOP2AP11388 AC090115.4-201ENST00000609970 188 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 AC008121.2-201ENST00000614647 523 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 AC008725.1-201ENST00000605123 2263 ntBASIC4.69□□□□□ -1.66
TOP2AP11388 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP2AP11388 OR56A5-201ENST00000340110 738 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 YPEL5P1-201ENST00000419731 367 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 RPS20P5-201ENST00000434808 360 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 AC245166.1-201ENST00000521012 253 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.68□□□□□ -1.66
TOP2AP11388 AP003102.1-201ENST00000525638 661 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.68□□□□□ -1.66
TOP2AP11388 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP2AP11388 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.68□□□□□ -1.66
TOP2AP11388 LINC00901.1-201ENST00000617252 152 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.68□□□□□ -1.66
TOP2AP11388 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.68□□□□□ -1.66
TOP2AP11388 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP2AP11388 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOP2AP11388 AL353743.4-201ENST00000422653 1547 ntBASIC4.68□□□□□ -1.66
TOP2AP11388 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP2AP11388 RPS4XP7-201ENST00000406274 780 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 RNA5SP508-201ENST00000411327 119 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 NECAP1P2-201ENST00000455668 727 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP2AP11388 AC007621.1-201ENST00000604544 437 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP2AP11388 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOP2AP11388 AC093831.2-201ENST00000624393 3427 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TOP2AP11388 SNORD62.1-201ENST00000362541 86 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP2AP11388 OR5AK3P-201ENST00000527486 1297 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP2AP11388 DNAJC19P3-201ENST00000594491 331 ntBASIC4.67□□□□□ -1.66
TOP2AP11388 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.67□□□□□ -1.66
TOP2AP11388 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
TOP2AP11388 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP2AP11388 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP2AP11388 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOP2AP11388 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TOP2AP11388 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 RN7SKP223-201ENST00000410582 62 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 AL451074.5-201ENST00000415894 435 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 AL049610.1-201ENST00000423374 372 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.66□□□□□ -1.66
TOP2AP11388 AC010095.1-201ENST00000443543 144 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 HPRT1P3-201ENST00000539521 576 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.66□□□□□ -1.66
TOP2AP11388 MIR4635-201ENST00000583759 79 ntBASIC4.66□□□□□ -1.66
TOP2AP11388 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.66□□□□□ -1.66
TOP2AP11388 VDAC1P3-201ENST00000434069 851 ntBASIC4.65□□□□□ -1.67
TOP2AP11388 FTH1P1-201ENST00000437933 532 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms