Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 FAM60DP-201ENST00000524174 632 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.29□□□□□ -1.88
COL4A1P02462 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
COL4A1P02462 AC074140.1-201ENST00000621617 208 ntBASIC3.29□□□□□ -1.88
COL4A1P02462 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL4A1P02462 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL4A1P02462 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A1P02462 RSL24D1P4-201ENST00000400938 484 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 RN7SKP247-201ENST00000411094 308 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 AC002553.2-201ENST00000453217 340 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 AL590639.1-201ENST00000456484 337 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 AL157394.1-201ENST00000562983 1224 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 MIR4435-1-201ENST00000582552 80 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 AL020991.1-201ENST00000612314 373 ntBASIC3.28□□□□□ -1.88
COL4A1P02462 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.28□□□□□ -1.88
COL4A1P02462 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.28□□□□□ -1.88
COL4A1P02462 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL4A1P02462 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
COL4A1P02462 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
COL4A1P02462 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL4A1P02462 AL138878.1-201ENST00000405131 347 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A1P02462 AC125238.1-201ENST00000448842 249 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AC010468.1-201ENST00000461022 817 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.27□□□□□ -1.89
COL4A1P02462 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 UBTFL10-201ENST00000528532 562 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A1P02462 AC122134.1-201ENST00000565664 1104 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 ZNF861P-201ENST00000588126 639 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.27□□□□□ -1.89
COL4A1P02462 AC083760.1-201ENST00000589621 670 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 BNIP3P10-201ENST00000605360 577 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.27□□□□□ -1.89
COL4A1P02462 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A1P02462 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A1P02462 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A1P02462 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
COL4A1P02462 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
COL4A1P02462 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
COL4A1P02462 RNU2-22P-201ENST00000411266 212 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AL451074.5-201ENST00000415894 435 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 MTCO1P39-201ENST00000426148 480 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL4A1P02462 MIR4635-201ENST00000583759 79 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AC026790.2-201ENST00000606282 430 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 AC087241.4-201ENST00000612441 480 ntBASIC3.27□□□□□ -1.89
COL4A1P02462 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
COL4A1P02462 GTF2H2B-203ENST00000508065 1432 ntBASIC3.26□□□□□ -1.89
COL4A1P02462 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL4A1P02462 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.26□□□□□ -1.89
COL4A1P02462 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL4A1P02462 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A1P02462 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL4A1P02462 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A1P02462 AC090281.1-201ENST00000523019 276 ntBASIC3.26□□□□□ -1.89
COL4A1P02462 AP003122.3-201ENST00000526316 255 ntBASIC3.26□□□□□ -1.89
COL4A1P02462 AC010620.2-201ENST00000600135 313 ntBASIC3.26□□□□□ -1.89
COL4A1P02462 ELF2P3-201ENST00000445099 1506 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL4A1P02462 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.25□□□□□ -1.89
COL4A1P02462 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL4A1P02462 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 RPL7P10-201ENST00000417407 739 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A1P02462 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.25□□□□□ -1.89
COL4A1P02462 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
COL4A1P02462 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.25□□□□□ -1.89
COL4A1P02462 AC016687.1-201ENST00000482574 353 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL4A1P02462 PRELID3BP7-201ENST00000503606 469 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 AL133271.1-201ENST00000538229 291 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
COL4A1P02462 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.25□□□□□ -1.89
COL4A1P02462 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
COL4A1P02462 AC046144.1-201ENST00000478559 1853 ntBASIC3.25□□□□□ -1.89
COL4A1P02462 SNORA70B-201ENST00000384210 135 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.24□□□□□ -1.89
COL4A1P02462 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.24□□□□□ -1.89
COL4A1P02462 EEF1B2P7-201ENST00000451177 676 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A1P02462 AL353743.4-201ENST00000422653 1547 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A1P02462 MIR26A1-201ENST00000362205 77 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 SNORD62.1-201ENST00000362541 86 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 FTH1P6-201ENST00000430768 320 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.24□□□□□ -1.89
COL4A1P02462 FGF7P3-201ENST00000454645 303 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 ANXA2P1-201ENST00000505539 926 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A1P02462 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL4A1P02462 AC068722.2-201ENST00000618734 544 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 AC064859.1-201ENST00000624741 174 ntBASIC3.24□□□□□ -1.89
COL4A1P02462 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A1P02462 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms