Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL1A1P02452 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.46□□□□□ -1.86
COL1A1P02452 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL1A1P02452 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL1A1P02452 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL1A1P02452 AC019155.1-201ENST00000382242 574 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.46□□□□□ -1.86
COL1A1P02452 B3GNT2P1-201ENST00000434960 952 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 RPL29P29-201ENST00000448725 423 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 AC107015.1-201ENST00000466902 747 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 AC126389.1-201ENST00000477436 290 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 RN7SL633P-201ENST00000488974 297 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 AP001025.2-201ENST00000490908 477 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.46□□□□□ -1.86
COL1A1P02452 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.46□□□□□ -1.86
COL1A1P02452 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.46□□□□□ -1.86
COL1A1P02452 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.46□□□□□ -1.86
COL1A1P02452 BMS1P7-201ENST00000602440 1052 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL1A1P02452 AC138393.1-206ENST00000540997 1886 ntBASIC3.46□□□□□ -1.86
COL1A1P02452 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL1A1P02452 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.45□□□□□ -1.86
COL1A1P02452 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.45□□□□□ -1.86
COL1A1P02452 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL1A1P02452 AL672167.1-206ENST00000356293 943 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
COL1A1P02452 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL1A1P02452 MIR34A-201ENST00000385130 110 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AL360182.1-201ENST00000397433 468 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 UQCRHP3-201ENST00000451503 251 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.45□□□□□ -1.86
COL1A1P02452 SNORD109B-201ENST00000458961 67 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 SNORD109A-201ENST00000459128 67 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 RPS27P29-201ENST00000463110 252 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AC106872.2-201ENST00000494303 480 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.45□□□□□ -1.86
COL1A1P02452 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.45□□□□□ -1.86
COL1A1P02452 AC114781.4-201ENST00000513707 639 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.45□□□□□ -1.86
COL1A1P02452 AC091515.1-201ENST00000548110 679 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.45□□□□□ -1.86
COL1A1P02452 AL049874.4-201ENST00000557593 255 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 MIR4644-201ENST00000579929 84 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AC096947.1-201ENST00000603233 470 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AL035413.2-201ENST00000604801 525 ntBASIC3.45□□□□□ -1.86
COL1A1P02452 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.45□□□□□ -1.86
COL1A1P02452 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL1A1P02452 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL1A1P02452 AC104446.1-201ENST00000613728 1321 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AL049780.3-201ENST00000624612 1583 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL1A1P02452 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL1A1P02452 RNU1-112P-201ENST00000364401 164 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AC073136.2-201ENST00000417282 849 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.44□□□□□ -1.86
COL1A1P02452 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.44□□□□□ -1.86
COL1A1P02452 FDX1P2-201ENST00000450769 375 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 RN7SL75P-201ENST00000461926 281 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AC128713.1-201ENST00000471495 306 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.44□□□□□ -1.86
COL1A1P02452 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AF186190.1-201ENST00000517470 480 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.44□□□□□ -1.86
COL1A1P02452 AC087241.4-201ENST00000612441 480 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.44□□□□□ -1.86
COL1A1P02452 MIR7153-201ENST00000637758 57 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 AC017002.4-201ENST00000604721 1525 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
COL1A1P02452 AC093831.2-201ENST00000624393 3427 ntBASIC3.44□□□□□ -1.86
COL1A1P02452 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.43□□□□□ -1.86
COL1A1P02452 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-1320P-201ENST00000390838 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-1269P-201ENST00000391139 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RN7SKP58-201ENST00000411010 305 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 AC007563.3-201ENST00000433233 371 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-599P-201ENST00000459383 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-1193P-201ENST00000459461 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RPL21P41-201ENST00000459863 264 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 AC126121.1-201ENST00000482313 553 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RPL31P13-201ENST00000484151 370 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.43□□□□□ -1.86
COL1A1P02452 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.43□□□□□ -1.86
COL1A1P02452 AC091544.4-201ENST00000555268 342 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-368P-201ENST00000620928 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 RNU6-538P-201ENST00000622329 107 ntBASIC3.43□□□□□ -1.86
COL1A1P02452 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.43□□□□□ -1.86
COL1A1P02452 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL1A1P02452 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.43□□□□□ -1.86
COL1A1P02452 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
COL1A1P02452 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.42□□□□□ -1.86
COL1A1P02452 MTCO1P52-201ENST00000433928 531 ntBASIC3.42□□□□□ -1.86
COL1A1P02452 AC245517.2-201ENST00000442890 346 ntBASIC3.42□□□□□ -1.86
COL1A1P02452 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.42□□□□□ -1.86
COL1A1P02452 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
COL1A1P02452 RNU4-29P-201ENST00000515943 174 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms