Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MIR6716-201ENST00000613413 80 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC090506.2-201ENST00000624521 419 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC010608.2-201ENST00000624830 470 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC138649.5-201ENST00000637456 137 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 AC011978.2-201ENST00000569835 2054 ntBASIC2.71□□□□□ -1.98
HLA-DQA1P01909 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQA1P01909 SRP72P2-201ENST00000344851 1979 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL359893.1-201ENST00000447628 1580 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SGO1P1-201ENST00000603525 1447 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 MIR148B-201ENST00000362252 99 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RNA5SP167-201ENST00000365461 116 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SNORA62-201ENST00000365493 153 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RNU6-444P-201ENST00000383988 108 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RNU6-1226P-201ENST00000384317 107 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SNORA70C-201ENST00000384538 135 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RNU6-441P-201ENST00000384545 106 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 MIR16-1-201ENST00000385271 89 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RPL21P65-201ENST00000406094 466 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 RPL23AP82-202ENST00000427528 469 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 MTCYBP31-201ENST00000438855 1122 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 HMGB3P30-201ENST00000457863 606 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 OR9M1P-201ENST00000459641 921 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 CENPBD1P1-201ENST00000464061 469 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 TMED11P-201ENST00000479478 690 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC093801.2-201ENST00000503966 1050 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SNORA70.19-201ENST00000516717 90 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AP003066.2-201ENST00000529375 555 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AC005962.2-201ENST00000611427 652 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 MIR8058-201ENST00000615737 89 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 USP8P1-201ENST00000494673 3183 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 MTND5P3-201ENST00000438536 1800 ntBASIC2.7□□□□□ -1.98
HLA-DQA1P01909 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQA1P01909 AL122126.1-201ENST00000546905 1318 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL121657.1-201ENST00000327215 531 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RNA5SP130-201ENST00000364431 114 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RNA5SP97-201ENST00000365006 84 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RNU6-619P-201ENST00000365146 108 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 GSTA8P-201ENST00000404253 637 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL355615.1-201ENST00000406187 641 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 U3.39-201ENST00000408569 239 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RNU6-628P-201ENST00000410675 107 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RN7SKP33-201ENST00000410942 340 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 Y_RNA.625-201ENST00000411256 107 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RNU6-575P-201ENST00000411326 105 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 TPT1P2-201ENST00000413105 503 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 UBE2V1P9-201ENST00000414760 368 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 SFR1P2-201ENST00000421841 730 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms