Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPL23AP76-201ENST00000441860 458 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.08□□□□□ -1.76
LDLRP01130 RPS27AP17-201ENST00000463344 455 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 AC108734.3-201ENST00000481241 1165 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC108145.1-201ENST00000503770 153 ntBASIC4.08□□□□□ -1.76
LDLRP01130 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.08□□□□□ -1.76
LDLRP01130 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 KRT19P6-201ENST00000510983 209 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC093755.1-201ENST00000512950 1023 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC008837.2-201ENST00000513076 418 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 RNA5SP135-201ENST00000517019 125 ntBASIC4.08□□□□□ -1.76
LDLRP01130 RNU1-45P-201ENST00000517191 141 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 MTCO2P15-201ENST00000532655 656 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.08□□□□□ -1.76
LDLRP01130 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.08□□□□□ -1.76
LDLRP01130 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.08□□□□□ -1.76
LDLRP01130 AL352979.3-201ENST00000553515 247 ntBASIC4.08□□□□□ -1.76
LDLRP01130 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.08□□□□□ -1.76
LDLRP01130 AC090695.1-201ENST00000561269 1222 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 AC119751.7-201ENST00000600494 245 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 AL109653.1-201ENST00000603091 248 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC243756.2-201ENST00000618406 463 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC022509.4-201ENST00000621404 572 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AL356121.2-201ENST00000624715 780 ntBASIC4.08□□□□□ -1.76
LDLRP01130 AC006065.6-201ENST00000625201 545 ntBASIC4.08□□□□□ -1.76
LDLRP01130 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.08□□□□□ -1.76
LDLRP01130 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LDLRP01130 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
LDLRP01130 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.07□□□□□ -1.76
LDLRP01130 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 AC021755.1-201ENST00000559747 1447 ntBASIC4.07□□□□□ -1.76
LDLRP01130 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.07□□□□□ -1.76
LDLRP01130 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 RNA5SP387-201ENST00000364226 106 ntBASIC4.07□□□□□ -1.76
LDLRP01130 RNA5SP513-201ENST00000364648 118 ntBASIC4.07□□□□□ -1.76
LDLRP01130 U3.15-201ENST00000365398 212 ntBASIC4.07□□□□□ -1.76
LDLRP01130 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 Y_RNA.436-201ENST00000384097 102 ntBASIC4.07□□□□□ -1.76
LDLRP01130 SNORD116-23-201ENST00000384645 92 ntBASIC4.07□□□□□ -1.76
LDLRP01130 SNORD116-4-201ENST00000384733 96 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL161909.1-201ENST00000397390 712 ntBASIC4.07□□□□□ -1.76
LDLRP01130 RN7SKP182-201ENST00000410772 298 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL161449.1-201ENST00000414531 1199 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL008987.1-201ENST00000415528 237 ntBASIC4.07□□□□□ -1.76
LDLRP01130 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 AL161631.1-201ENST00000417933 486 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 ELOCP9-201ENST00000418624 239 ntBASIC4.07□□□□□ -1.76
LDLRP01130 HMGB1P49-201ENST00000418882 569 ntBASIC4.07□□□□□ -1.76
LDLRP01130 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.07□□□□□ -1.76
LDLRP01130 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 MUPP-201ENST00000438111 566 ntBASIC4.07□□□□□ -1.76
LDLRP01130 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.07□□□□□ -1.76
LDLRP01130 RPL23AP43-201ENST00000446445 471 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 NDUFA5P7-201ENST00000452914 242 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.07□□□□□ -1.76
LDLRP01130 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.07□□□□□ -1.76
LDLRP01130 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.07□□□□□ -1.76
LDLRP01130 EIF5A2P1-201ENST00000564027 460 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.07□□□□□ -1.76
LDLRP01130 AP001094.1-201ENST00000579805 193 ntBASIC4.07□□□□□ -1.76
LDLRP01130 AC083899.3-201ENST00000603413 594 ntBASIC4.07□□□□□ -1.76
LDLRP01130 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
LDLRP01130 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDLRP01130 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
LDLRP01130 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDLRP01130 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms