Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC073055.1-201ENST00000456901 1621 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN9O95484 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC090337.1-201ENST00000579651 2074 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 SNORD9-201ENST00000362566 104 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 SNORD3H-201ENST00000384486 214 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AL590704.1-201ENST00000402856 794 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 RN7SKP53-201ENST00000411337 315 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN9O95484 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 MTCYBP24-201ENST00000420387 1106 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 VN1R34P-201ENST00000447387 883 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AL096803.2-201ENST00000450032 677 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN9O95484 RPS4XP6-201ENST00000477670 797 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 ARL2BPP6-201ENST00000512757 439 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN9O95484 HMGB1P1-201ENST00000522557 636 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN9O95484 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC004217.3-201ENST00000551552 878 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN9O95484 MIR3944-201ENST00000581277 108 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 RN7SL622P-201ENST00000585292 275 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN9O95484 AC012531.5-201ENST00000611375 151 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AC006133.1-201ENST00000617106 264 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 AC068620.4-201ENST00000636730 1182 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 SEPT7P7-201ENST00000420492 1301 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN9O95484 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.41□□□□□ -1.86
CLDN9O95484 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN9O95484 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.86
CLDN9O95484 GABPAP-201ENST00000419271 1356 ntBASIC3.4□□□□□ -1.86
CLDN9O95484 AC025263.3-201ENST00000622965 1396 ntBASIC3.4□□□□□ -1.86
CLDN9O95484 MFSD8-233ENST00000641482 4860 ntBASIC3.4□□□□□ -1.86
CLDN9O95484 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.86
CLDN9O95484 RNA5SP124-201ENST00000362739 110 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 RNU6-374P-201ENST00000364146 108 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 RNA5SP189-201ENST00000364920 115 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 PTGES3P2-201ENST00000407942 482 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 AL035423.1-201ENST00000420331 213 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN9O95484 RPL17P35-201ENST00000432217 549 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 NOTCH2P1-201ENST00000443481 624 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 HSFY3P-201ENST00000444242 1191 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDN9O95484 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN9O95484 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 CEACAMP4-201ENST00000457676 421 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 SETP6-201ENST00000479329 568 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AP000563.1-201ENST00000490865 758 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AP001086.1-201ENST00000494882 321 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC020893.1-201ENST00000502452 580 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 TRAV31-201ENST00000502780 342 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN9O95484 SNORA70.19-201ENST00000516717 90 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 OR5D17P-201ENST00000531492 978 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC011611.5-201ENST00000552477 578 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC053481.3-201ENST00000577881 843 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC090616.5-202ENST00000582111 297 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN9O95484 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN9O95484 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC112230.1-201ENST00000604342 547 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC018754.1-201ENST00000607486 925 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 AC106730.3-201ENST00000624568 641 ntBASIC3.4□□□□□ -1.87
CLDN9O95484 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN9O95484 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms