Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 RNA5SP447-201ENST00000363749 119 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 MT-TC-201ENST00000387405 66 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
UPK1BO75841 SNORA26.7-201ENST00000391288 122 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 SPTLC1P2-201ENST00000407089 121 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 SNORA3.3-201ENST00000408712 125 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 AL445183.3-201ENST00000414168 502 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 RPL21P110-201ENST00000433345 446 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 RPS26P56-201ENST00000444468 240 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC073264.2-201ENST00000448886 166 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 GSTA11P-201ENST00000452866 669 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 Z95152.1-201ENST00000453556 656 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AL513533.1-201ENST00000453728 415 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 BX248409.1-201ENST00000455497 255 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
UPK1BO75841 RNF138P1-201ENST00000502765 546 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AK3P4-201ENST00000504283 583 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC111000.3-201ENST00000508057 576 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1BO75841 RN7SKP92-201ENST00000517266 244 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1BO75841 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC092470.1-201ENST00000546187 132 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.87□□□□□ -1.95
UPK1BO75841 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC005412.1-201ENST00000580812 1049 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC112503.2-201ENST00000609005 552 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 AC016769.4-201ENST00000616893 535 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 MIR6729-201ENST00000618194 65 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1BO75841 AC090337.1-201ENST00000579651 2074 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
UPK1BO75841 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1BO75841 AP001350.1-201ENST00000601906 1524 ntBASIC2.87□□□□□ -1.95
UPK1BO75841 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
UPK1BO75841 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
UPK1BO75841 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
UPK1BO75841 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 RNU6-444P-201ENST00000383988 108 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 MIR525-201ENST00000384978 85 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 RPL7P60-201ENST00000397636 735 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AL121972.1-201ENST00000402023 252 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 SSXP10-201ENST00000402595 565 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 MIR1178-201ENST00000408396 91 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 OR8G2P-201ENST00000412796 908 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AC008280.1-201ENST00000418851 412 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC069213.2-201ENST00000420238 366 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1BO75841 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1BO75841 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1BO75841 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1BO75841 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1BO75841 RPL39P40-201ENST00000445481 146 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC005002.1-201ENST00000447458 540 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 HMGB1P22-201ENST00000505315 124 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC112198.1-201ENST00000505369 1220 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 NDUFB5P1-201ENST00000508134 564 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 MTCO3P44-201ENST00000510977 541 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1BO75841 RNU6-1102P-201ENST00000516149 96 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 RNU6-362P-201ENST00000516736 90 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 HIGD1AP6-201ENST00000521833 279 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AC109635.4-202ENST00000531666 412 ntBASIC2.86□□□□□ -1.95
UPK1BO75841 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1BO75841 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1BO75841 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1BO75841 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms