Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SL604P-201ENST00000492589 296 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC092045.1-201ENST00000495716 1231 ntBASIC3.76□□□□□ -1.81
SNX3O60493 FCF1P3-201ENST00000496394 590 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC008638.1-201ENST00000506035 866 ntBASIC3.76□□□□□ -1.81
SNX3O60493 MTCO1P30-201ENST00000515244 580 ntBASIC3.76□□□□□ -1.81
SNX3O60493 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 RNA5SP208-201ENST00000516156 78 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.76□□□□□ -1.81
SNX3O60493 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.76□□□□□ -1.81
SNX3O60493 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 OR4A45P-201ENST00000529954 901 ntBASIC3.76□□□□□ -1.81
SNX3O60493 ZNF705CP-201ENST00000530515 889 ntBASIC3.76□□□□□ -1.81
SNX3O60493 MTCO2P15-201ENST00000532655 656 ntBASIC3.76□□□□□ -1.81
SNX3O60493 OR8L1P-201ENST00000534005 955 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC011602.1-201ENST00000546484 331 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC091516.1-201ENST00000549191 703 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.76□□□□□ -1.81
SNX3O60493 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC022662.1-201ENST00000580252 331 ntBASIC3.76□□□□□ -1.81
SNX3O60493 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC005412.1-201ENST00000580812 1049 ntBASIC3.76□□□□□ -1.81
SNX3O60493 OR4G1P-201ENST00000588632 938 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX3O60493 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC234772.3-201ENST00000602277 528 ntBASIC3.76□□□□□ -1.81
SNX3O60493 DUXAP3-201ENST00000603616 594 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC107952.2-201ENST00000606048 486 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AC007349.4-201ENST00000608114 532 ntBASIC3.76□□□□□ -1.81
SNX3O60493 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
SNX3O60493 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNX3O60493 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC067852.7-201ENST00000623270 535 ntBASIC3.76□□□□□ -1.81
SNX3O60493 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.76□□□□□ -1.81
SNX3O60493 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SNX3O60493 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX3O60493 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 AC131971.1-201ENST00000332881 1482 ntBASIC3.75□□□□□ -1.81
SNX3O60493 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX3O60493 AL133384.1-201ENST00000412744 351 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC104837.2-201ENST00000427236 424 ntBASIC3.75□□□□□ -1.81
SNX3O60493 COX7BP2-201ENST00000437976 242 ntBASIC3.75□□□□□ -1.81
SNX3O60493 FGF7P5-201ENST00000441829 291 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC073648.4-201ENST00000442655 781 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC009963.2-201ENST00000453431 138 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC010468.1-201ENST00000461022 817 ntBASIC3.75□□□□□ -1.81
SNX3O60493 RN7SL354P-201ENST00000469282 294 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX3O60493 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX3O60493 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.75□□□□□ -1.81
SNX3O60493 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX3O60493 OR4G11P-201ENST00000492842 939 ntBASIC3.75□□□□□ -1.81
SNX3O60493 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 KLRA1P-201ENST00000503499 986 ntBASIC3.75□□□□□ -1.81
SNX3O60493 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 NDUFB5P1-201ENST00000508134 564 ntBASIC3.75□□□□□ -1.81
SNX3O60493 RAC1P2-201ENST00000511164 579 ntBASIC3.75□□□□□ -1.81
SNX3O60493 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX3O60493 IGKV2D-36-201ENST00000518643 226 ntBASIC3.75□□□□□ -1.81
SNX3O60493 EEF1A1P37-201ENST00000522748 715 ntBASIC3.75□□□□□ -1.81
SNX3O60493 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.75□□□□□ -1.81
SNX3O60493 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
SNX3O60493 CBX3P5-201ENST00000552017 521 ntBASIC3.75□□□□□ -1.81
SNX3O60493 CENPUP2-201ENST00000555897 1186 ntBASIC3.75□□□□□ -1.81
SNX3O60493 TGIF1P1-201ENST00000558095 802 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC044860.2-201ENST00000561005 179 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX3O60493 MTATP6P24-201ENST00000576835 677 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX3O60493 AC113368.1-201ENST00000603736 382 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 AL451074.6-201ENST00000608512 729 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AC063944.3-201ENST00000609969 533 ntBASIC3.75□□□□□ -1.81
SNX3O60493 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX3O60493 AC130650.2-201ENST00000618736 2403 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AL359893.1-201ENST00000447628 1580 ntBASIC3.75□□□□□ -1.81
SNX3O60493 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
SNX3O60493 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX3O60493 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SNX3O60493 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.74□□□□□ -1.81
SNX3O60493 ZNF876P-202ENST00000398732 1485 ntBASIC3.74□□□□□ -1.81
SNX3O60493 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SNX3O60493 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX3O60493 RNU1-132P-201ENST00000364300 164 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms