Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 AP002802.2-201ENST00000605877 235 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM1O00151 RNU6-156P-201ENST00000621869 107 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 FAM157B-203ENST00000639350 358 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 MFSD8-236ENST00000641509 4050 ntBASIC3.62□□□□□ -1.83
PDLIM1O00151 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM1O00151 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM1O00151 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM1O00151 MTND5P3-201ENST00000438536 1800 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 OR4A15-201ENST00000314706 1035 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 MCTS2P-201ENST00000394552 546 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC126124.2-201ENST00000413542 321 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM1O00151 HIGD1AP4-201ENST00000430194 280 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM1O00151 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 YWHAZP8-201ENST00000436935 731 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM1O00151 RAB11AP1-201ENST00000442978 646 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 HSFY6P-201ENST00000445573 403 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM1O00151 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM1O00151 AC068587.1-201ENST00000483613 781 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 HMGB1P38-201ENST00000490557 577 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM1O00151 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM1O00151 RNU6-488P-201ENST00000515918 99 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 SOD1P3-201ENST00000518682 454 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM1O00151 SUMO2P20-201ENST00000520803 283 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 HIGD1AP6-201ENST00000521833 279 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PDLIM1O00151 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM1O00151 MIR3160-1-201ENST00000577972 85 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC018754.1-201ENST00000607486 925 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM1O00151 AL133445.2-201ENST00000611191 527 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 ZYXP1-201ENST00000617638 118 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AL731566.2-201ENST00000618971 317 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 AC068724.3-201ENST00000625906 87 ntBASIC3.61□□□□□ -1.83
PDLIM1O00151 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PDLIM1O00151 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 RNU6-1176P-201ENST00000390955 107 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 DSTNP4-201ENST00000399472 474 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 MOB1AP1-201ENST00000430903 535 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AL513175.1-201ENST00000431492 780 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 MTCYBP15-201ENST00000433123 1127 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM1O00151 RPL38P1-201ENST00000460914 211 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 ACTG1P13-201ENST00000486987 1043 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC093267.1-201ENST00000489176 961 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 RPL5P23-201ENST00000496040 868 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC114967.1-201ENST00000504890 259 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC091860.1-201ENST00000505723 432 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC069306.1-201ENST00000507006 843 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC023141.12-201ENST00000512399 199 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC108064.1-201ENST00000513791 460 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 ZNF971P-201ENST00000562068 1249 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 MIR4504-201ENST00000577413 92 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC008507.1-201ENST00000587506 734 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AP001542.2-201ENST00000593141 364 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AL020997.3-201ENST00000602843 359 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC002487.1-201ENST00000604565 994 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 RNU4-89P-201ENST00000607443 133 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 AC112484.5-201ENST00000624189 228 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC118273.1-201ENST00000525324 3006 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM1O00151 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM1O00151 SGO1P1-201ENST00000603525 1447 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 AC107081.3-201ENST00000612715 2034 ntBASIC3.6□□□□□ -1.83
PDLIM1O00151 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.83
PDLIM1O00151 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PDLIM1O00151 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms