Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AP003385.6-201ENST00000531603 374 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 AC135001.1-201ENST00000544546 283 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC188H7C350 MTND3P13-201ENST00000574391 343 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 RN7SL339P-201ENST00000580597 296 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC188H7C350 KLKP1-201ENST00000595979 403 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AL390838.2-201ENST00000602394 274 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC069545.1-201ENST00000605671 358 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC024933.1-201ENST00000608472 348 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC016597.2-201ENST00000613256 341 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 AC114781.5-201ENST00000615297 108 ntBASIC3.97□□□□□ -1.77
CCDC188H7C350 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC188H7C350 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC188H7C350 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC188H7C350 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
CCDC188H7C350 AC139713.2-214ENST00000642059 1811 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 snoZ40.1-201ENST00000364540 72 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 RNU6-283P-201ENST00000364788 107 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 RNU6-657P-201ENST00000383904 107 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 RNU4-78P-201ENST00000410940 126 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 OR8G2P-201ENST00000412796 908 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC007435.1-201ENST00000421086 415 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 MRPS36P1-201ENST00000421291 307 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 SDCBPP2-201ENST00000424643 885 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC004022.1-201ENST00000447766 1066 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC188H7C350 TPT1P12-201ENST00000448968 492 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC006480.1-201ENST00000449887 378 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 SNRPGP5-201ENST00000456003 220 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 UBE2V1P12-201ENST00000503954 474 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 PRELID3BP5-201ENST00000508612 460 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 TMEM248P1-201ENST00000510579 951 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 SCARNA1-201ENST00000517138 166 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AP000790.1-201ENST00000528891 737 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC006518.1-201ENST00000541449 943 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC188H7C350 SULT1C2P1-202ENST00000562418 459 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC138915.2-201ENST00000569776 97 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC005412.1-201ENST00000580812 1049 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC091057.3-201ENST00000602684 733 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC008745.1-201ENST00000604064 271 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AL445423.1-201ENST00000609941 536 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC231759.1-201ENST00000616455 597 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 AC138649.5-201ENST00000637456 137 ntBASIC3.96□□□□□ -1.78
CCDC188H7C350 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC188H7C350 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC188H7C350 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC188H7C350 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC188H7C350 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC188H7C350 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC188H7C350 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC188H7C350 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC188H7C350 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC188H7C350 Y_RNA.25-201ENST00000362528 102 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 RNU6-251P-201ENST00000363235 104 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 RNU1-32P-201ENST00000363937 159 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 SNORD82-201ENST00000365530 70 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 Y_RNA.472-201ENST00000384322 102 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 SNORA57.3-201ENST00000411095 141 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AC009480.2-201ENST00000422916 432 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC006989.1-201ENST00000427212 131 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC188H7C350 EEF1A1P39-201ENST00000440791 250 ntBASIC3.95□□□□□ -1.78
CCDC188H7C350 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms