Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 U1.1-201ENST00000384101 164 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC092647.1-201ENST00000420654 287 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC244098.2-201ENST00000422068 99 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RPP40P1-201ENST00000426762 456 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC092634.2-201ENST00000428146 1010 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 Z99714.1-201ENST00000450463 807 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RPS26P15-201ENST00000488067 348 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC139783.2-201ENST00000504847 1145 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC093853.1-201ENST00000515689 483 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 snoZ278.1-201ENST00000517059 112 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC104417.1-201ENST00000523974 751 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC074051.3-201ENST00000570238 358 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC053481.3-201ENST00000577881 843 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 CCDC58P3-201ENST00000590792 430 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 Z82195.1-201ENST00000604558 398 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC018754.1-201ENST00000607486 925 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AP000238.1-201ENST00000608759 426 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RNU6-1192P-201ENST00000612197 107 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AL121772.2-201ENST00000614331 297 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 RNU6-489P-201ENST00000618289 107 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC233309.1-201ENST00000619522 751 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 AL359893.1-201ENST00000447628 1580 ntBASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NPIPA2E9PIF3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 RNA5SP189-201ENST00000364920 115 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 RNU6-298P-201ENST00000390888 96 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MTCO2P31-201ENST00000402702 684 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 TCEA1P2-201ENST00000420496 906 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC087650.1-201ENST00000431445 468 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 B3GNT2P1-201ENST00000434960 952 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC104982.1-201ENST00000478775 574 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC026414.1-201ENST00000504046 698 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 SNORA19.3-201ENST00000516165 130 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 RNU6-352P-201ENST00000516908 107 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AP001207.1-201ENST00000524051 481 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms