Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC010680.4-201ENST00000605334 543 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BRDTP1-201ENST00000605735 677 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP001521.1-201ENST00000609150 300 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC114781.5-201ENST00000615297 108 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP000346.3-201ENST00000622821 210 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC011944.2-201ENST00000624440 683 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL355480.1-201ENST00000629041 99 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR1322-201ENST00000638013 71 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CDR1-202ENST00000625883 1485 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC012618.3-205ENST00000637896 1496 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-1214P-201ENST00000363650 109 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-657P-201ENST00000383904 107 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SKP33-201ENST00000410942 340 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL133384.1-201ENST00000412744 351 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC005005.2-201ENST00000420779 380 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL139421.1-201ENST00000423010 169 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC010099.3-201ENST00000423896 409 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 COX6CP15-201ENST00000426313 211 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTND1P32-201ENST00000433043 938 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPL23AP16-201ENST00000441715 421 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 EXTL2P1-201ENST00000446218 416 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GAPDHP36-201ENST00000480688 918 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC091167.1-201ENST00000492017 396 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL132838.2-201ENST00000492041 314 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNF138P1-201ENST00000502765 546 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PDCL2P2-201ENST00000533651 189 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC135001.1-201ENST00000544546 283 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL133457.1-201ENST00000564251 987 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL354943.1-201ENST00000572103 781 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC009220.3-201ENST00000604318 586 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC069304.2-201ENST00000605154 435 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC131235.4-201ENST00000609288 620 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TUSC7.1-201ENST00000610969 165 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC121761.2-201ENST00000617300 689 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP000484.1-201ENST00000620067 1252 ntBASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRBV4-1A0A0J9YWV2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC090229.1-201ENST00000590983 1609 ntBASIC3.59□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 HLFP1-201ENST00000402375 499 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SSXP10-201ENST00000402595 565 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RNU2-28P-201ENST00000410457 189 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC073264.1-201ENST00000411508 416 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 KCTD10P1-201ENST00000434203 625 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TBCAP1-201ENST00000436520 327 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MTND2P20-201ENST00000440805 661 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 CEACAMP9-201ENST00000442990 513 ntBASIC3.58□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms