Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC004022.1-201ENST00000447766 1066 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 NPM1P13-201ENST00000452663 865 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC010285.3-201ENST00000511668 676 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNU1-95P-201ENST00000516357 160 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNU1-128P-201ENST00000516704 160 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC026403.1-201ENST00000518938 295 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 MTND3P13-201ENST00000574391 343 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 NTAN1P1-201ENST00000603150 646 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AL391497.1-201ENST00000608671 547 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1G3Q9Y6M4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC00561-201ENST00000565815 2738 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 U8.11-201ENST00000384699 133 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 U8.12-201ENST00000384701 133 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL079342.2-201ENST00000403367 482 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL356320.2-201ENST00000417263 507 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 KRR1P1-201ENST00000419430 803 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC069157.1-201ENST00000421749 137 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL591419.1-201ENST00000427423 339 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 HMGB3P6-201ENST00000444896 598 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 Z73417.1-201ENST00000447373 778 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL136097.1-201ENST00000456945 913 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC005410.1-202ENST00000460347 485 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 NAP1L1P3-201ENST00000462291 880 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC098862.1-201ENST00000504991 413 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC006499.5-201ENST00000505037 514 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC087369.1-201ENST00000520775 996 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC023813.2-201ENST00000564321 469 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 CLIC4P2-201ENST00000601934 717 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC022022.2-201ENST00000602989 360 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC010680.3-201ENST00000604215 520 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AL713922.2-201ENST00000619384 716 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC000123.2-201ENST00000623124 461 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 AC124312.6-202ENST00000623624 418 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC02211-204ENST00000642024 1070 ntBASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1G3Q9Y6M4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AC119744.1-201ENST00000454746 1715 ntBASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AL139247.1-201ENST00000422768 325 ntBASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1G3Q9Y6M4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms