Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008033.1-201ENST00000216407 1162 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU5F-7P-201ENST00000363696 115 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 UBBP2-201ENST00000376781 231 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AL359643.1-201ENST00000404109 423 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RPS4XP9-201ENST00000405151 780 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AL445487.1-201ENST00000415694 1580 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC119751.6-201ENST00000416712 186 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 SEPT2P1-201ENST00000419651 180 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AL391219.1-201ENST00000422570 483 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC244035.1-201ENST00000430042 390 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RPS3AP54-201ENST00000435535 734 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 KATNBL1P6-201ENST00000453433 915 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RNA5SP103-201ENST00000459503 118 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RPL12P20-201ENST00000475538 479 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC034222.1-201ENST00000494052 532 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC013828.2-201ENST00000532487 235 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 GSTP1P1-201ENST00000548078 319 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AL110118.1-201ENST00000553543 400 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SL690P-201ENST00000582087 240 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008507.1-201ENST00000587506 734 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC092653.1-201ENST00000608509 531 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC009090.3-201ENST00000616553 565 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AP000346.3-201ENST00000622821 210 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 AC092447.10-201ENST00000620607 1652 ntBASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC135352.1-201ENST00000506173 1418 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNA5SP258-201ENST00000362750 119 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-343P-201ENST00000364709 104 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-744P-201ENST00000365557 107 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-1316P-201ENST00000384242 108 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU1-82P-201ENST00000390851 165 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AL590762.2-201ENST00000395798 571 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 ARL4AP5-201ENST00000404372 599 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SKP106-201ENST00000410832 272 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC245052.5-201ENST00000416320 649 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 BMI1P1-201ENST00000445879 941 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC053481.1-201ENST00000467217 306 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SL354P-201ENST00000469282 294 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-513P-201ENST00000516104 104 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC079075.1-201ENST00000559543 878 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 RNF138P2-201ENST00000603490 592 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC103710.4-201ENST00000609301 899 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC073114.1-201ENST00000612027 490 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 Z69908.1-201ENST00000622603 247 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC091965.5-201ENST00000624785 342 ntBASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL4A3BPQ9Y5P4 AP001642.1-201ENST00000624727 2117 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms