Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 MTCO1P30-201ENST00000515244 580 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 RNU6-885P-201ENST00000516607 104 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 RNA5SP73-201ENST00000516744 108 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 HMGB1P19-201ENST00000517578 577 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 HIGD1AP6-201ENST00000521833 279 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AL121766.1-201ENST00000547436 487 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC004217.3-201ENST00000551552 878 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 TVP23BP1-201ENST00000557500 617 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 MTCYBP28-201ENST00000566728 1132 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC012435.1-202ENST00000568772 240 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AP005136.1-201ENST00000579765 429 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC007179.3-201ENST00000604976 235 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC008443.7-201ENST00000622195 246 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 Z69908.1-201ENST00000622603 247 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC015908.5-201ENST00000623289 343 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC098679.4-201ENST00000624241 654 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC008013.2-202ENST00000637965 364 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AL596275.2-204ENST00000641628 552 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AL596275.2-206ENST00000641957 626 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 AC092162.3-201ENST00000624511 1624 ntBASIC4.31□□□□□ -1.72
RAI2Q9Y5P3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC093775.1-201ENST00000624154 1868 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL512646.1-201ENST00000269395 1077 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 RNU2-6P-201ENST00000411404 190 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC019178.2-201ENST00000423595 505 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL117339.2-201ENST00000430475 180 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL513175.1-201ENST00000431492 780 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 GOT2P5-201ENST00000433995 546 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC129850.1-201ENST00000436203 508 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC004865.1-201ENST00000442276 1003 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC073387.1-201ENST00000453261 709 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 MTCO3P16-201ENST00000454456 754 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 RAP1BP2-201ENST00000478270 544 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC093281.2-201ENST00000510153 597 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC007954.1-201ENST00000554198 494 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 MIR3200-201ENST00000580767 85 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC006270.3-201ENST00000605967 1036 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC073114.1-201ENST00000612027 490 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
RAI2Q9Y5P3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 AC107982.1-201ENST00000507171 1300 ntBASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.29□□□□□ -1.72
RAI2Q9Y5P3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms