Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AP000756.2-201ENST00000624168 2567 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC008758.3-201ENST00000507003 1829 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC009951.1-201ENST00000623674 2614 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1284P-201ENST00000363701 100 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-890P-201ENST00000384121 107 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL23AP17-201ENST00000401064 499 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007562.1-201ENST00000421819 517 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 POU5F1P5-201ENST00000445059 658 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 RPS15AP27-201ENST00000449183 343 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC239809.1-201ENST00000450470 217 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 RPS27AP3-201ENST00000453803 454 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 SETP20-201ENST00000457046 852 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC116337.1-201ENST00000509680 687 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.708-201ENST00000516950 96 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 HMGN1P26-201ENST00000558737 303 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC018552.1-201ENST00000562099 811 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR4293-201ENST00000584305 78 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 NPIPB1P-202ENST00000588786 828 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL670379.6-201ENST00000603753 252 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC008162.1-201ENST00000604718 254 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL670379.1-201ENST00000604752 252 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL670379.5-201ENST00000605253 252 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL670379.8-201ENST00000605353 252 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 PRR13P7-201ENST00000605538 430 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL670379.7-201ENST00000605823 252 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007485.1-201ENST00000616755 206 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR6811-201ENST00000620409 58 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AP001784.1-201ENST00000624107 428 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 AL031119.1-201ENST00000404707 1879 ntBASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
PCDHGA11Q9Y5H2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 MTND5P30-201ENST00000452896 1731 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.80-201ENST00000362996 102 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SKP292-201ENST00000365522 317 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 GNG5P2-201ENST00000372054 207 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-128P-201ENST00000383976 107 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.463-201ENST00000384271 102 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1127P-201ENST00000384580 107 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1222P-201ENST00000384615 107 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.556-201ENST00000384677 113 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AL109755.1-201ENST00000401791 649 ntBASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHGA11Q9Y5H2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms