Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 TVP23CP2-201ENST00000571473 623 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 MIR4637-201ENST00000582405 84 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 HMGN1P30-201ENST00000589286 268 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 OR7E18P-201ENST00000592589 702 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC087763.1-201ENST00000603391 286 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC104687.2-201ENST00000604442 342 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL445222.1-201ENST00000607259 628 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RBPJP2-201ENST00000618187 1444 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC092326.2-201ENST00000624772 1561 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 OR11H5P-202ENST00000641612 1325 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 Y_RNA.1-201ENST00000352915 104 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AL078599.1-201ENST00000402075 293 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 HMGB1P17-201ENST00000403495 628 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 SPTLC1P2-201ENST00000407089 121 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 ISCA1P6-201ENST00000427740 390 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AL627308.1-201ENST00000435693 821 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RSU1P2-202ENST00000437884 485 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 CEACAMP7-201ENST00000444105 496 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC099563.1-201ENST00000456086 418 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC090142.1-201ENST00000465776 462 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RN7SL808P-201ENST00000496066 299 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC140172.1-201ENST00000502928 141 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 MRPS33P2-201ENST00000507850 322 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RNU2-46P-201ENST00000517038 113 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 SNORD39.3-201ENST00000584451 71 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 UBE2V2P2-201ENST00000587677 504 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 TPMTP1-201ENST00000592307 737 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AC007363.1-201ENST00000604736 620 ntBASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PCDHB4Q9Y5E5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RNU6-984P-201ENST00000363236 109 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 Y_RNA.160-201ENST00000363677 92 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RNU4-76P-201ENST00000364509 141 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RNU6-1103P-201ENST00000384150 107 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RNU6-1011P-201ENST00000384668 107 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 SNORD115.1-201ENST00000391109 76 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RBMY2QP-201ENST00000429799 1147 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 PPIAP13-201ENST00000434706 478 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 ARPC3P1-201ENST00000437218 533 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 ACTR3P2-201ENST00000439585 1257 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 AC087312.1-201ENST00000471411 480 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RBM43P1-201ENST00000476891 1081 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RPL7AP6-201ENST00000477943 801 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 MTND1P3-201ENST00000484956 952 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RN7SL97P-201ENST00000486780 299 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 AC005912.1-201ENST00000495392 255 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 RNF138P1-201ENST00000502765 546 ntBASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDHB4Q9Y5E5 AC025465.4-201ENST00000513422 638 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms