Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MTCO2P16-201ENST00000436962 677 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 MTND4P6-201ENST00000438297 472 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RPL23AP16-201ENST00000441715 421 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RPL39P6-201ENST00000448289 150 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 TRGVB-201ENST00000453257 471 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 SETP11-201ENST00000473027 690 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 RN7SL459P-201ENST00000481078 302 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC005726.1-201ENST00000494679 427 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC091435.1-201ENST00000505442 584 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC110792.2-201ENST00000510278 224 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC026412.2-201ENST00000512270 1075 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 MTCYBP43-201ENST00000513621 740 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC106038.2-201ENST00000520706 568 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 DEFB131D-201ENST00000526803 184 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 ZNF705CP-201ENST00000530515 889 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC008127.2-201ENST00000549925 1075 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 CYCSP2-201ENST00000558168 301 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 MIR5096-201ENST00000583713 70 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC233280.2-201ENST00000603917 1070 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL356218.2-201ENST00000605264 187 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC068722.2-201ENST00000618734 544 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 LINC01109-201ENST00000603837 3081 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKP3Q9Y446 MTND5P28-201ENST00000438005 1594 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 RNU1-108P-201ENST00000362556 161 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 Y_RNA.51-201ENST00000362725 102 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 RNU6-374P-201ENST00000364146 108 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 Y_RNA.436-201ENST00000384097 102 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 SNORA26.8-201ENST00000391306 124 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 HSFY4P-201ENST00000415994 1181 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 NUP35P2-201ENST00000416748 943 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 Z99497.1-201ENST00000421282 135 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 EIF4EP1-201ENST00000422311 642 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 RBMY1KP-201ENST00000423480 476 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 BMS1P19-201ENST00000433925 393 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 MTND1P30-201ENST00000441241 901 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 TPT1P13-201ENST00000449760 499 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC006463.2-201ENST00000473326 348 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 RAP1BP2-201ENST00000478270 544 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 MTATP6P22-201ENST00000507369 598 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 NDUFA5P2-201ENST00000519723 344 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 PHBP17-201ENST00000528576 541 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC023161.2-201ENST00000551218 780 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.34□□□□□ -1.71
PKP3Q9Y446 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.34□□□□□ -1.71
PKP3Q9Y446 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP3Q9Y446 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PKP3Q9Y446 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PKP3Q9Y446 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 EIF2AP4-201ENST00000424793 1781 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms