Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 LINC00561-201ENST00000565815 2738 ntBASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 ZNF137P-201ENST00000456718 1920 ntBASIC4.27□□□□□ -1.73
DTX4Q9Y2E6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 RNU6-1226P-201ENST00000384317 107 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 Y_RNA.505-201ENST00000384489 102 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 Y_RNA.553-201ENST00000384670 102 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MIR3074-201ENST00000384885 81 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MIR141-201ENST00000384975 95 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 RNA5SP397-201ENST00000391323 118 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 EIF5P1-201ENST00000400019 1231 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 LARP1BP3-201ENST00000437229 869 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC069285.2-201ENST00000440210 275 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL831737.1-201ENST00000441288 271 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 ISCUP1-201ENST00000454451 448 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 TRBV26-201ENST00000456572 344 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MEMO1P3-201ENST00000459811 302 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 FAM172BP-201ENST00000487497 1089 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL117351.2-201ENST00000513571 157 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC104057.1-201ENST00000515547 497 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AP001781.1-201ENST00000530977 207 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL133457.1-201ENST00000564251 987 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 PCMTD1P2-201ENST00000565017 355 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC006362.1-201ENST00000567392 174 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AL133338.2-201ENST00000604292 736 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 AC012360.2-201ENST00000609349 391 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 OR4G11P-202ENST00000642116 1414 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 MTCO1P23-201ENST00000415223 1526 ntBASIC4.26□□□□□ -1.73
DTX4Q9Y2E6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC126755.2-208ENST00000327792 462 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC138969.1-213ENST00000331436 462 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 SNORA71.2-201ENST00000364941 134 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC016769.3-201ENST00000396562 315 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 ARF4P3-201ENST00000397387 509 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 GLULP6-201ENST00000399502 913 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 SSXP10-201ENST00000402595 565 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RPS16P5-201ENST00000406501 404 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RNU6-648P-201ENST00000410190 107 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RN7SKP142-201ENST00000411236 328 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 OR8G2P-201ENST00000412796 908 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RPL7P30-201ENST00000420888 709 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC245028.1-201ENST00000423259 256 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AL049610.1-201ENST00000423374 372 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 USP9YP14-201ENST00000430663 563 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AL353706.1-201ENST00000436728 494 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 MUPP-201ENST00000438111 566 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 VN1R32P-201ENST00000452234 905 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 CYCSP34-201ENST00000458172 304 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 RPS15AP17-201ENST00000470598 390 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC006463.2-201ENST00000473326 348 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 MTND5P4-201ENST00000514978 288 ntBASIC4.25□□□□□ -1.73
DTX4Q9Y2E6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms