Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC011460.1-201ENST00000636268 1834 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-511P-201ENST00000363496 107 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-61P-201ENST00000365528 109 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 MIR130B-202ENST00000385018 82 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-550P-201ENST00000391057 101 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC097463.1-201ENST00000447288 481 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RPL23AP31-201ENST00000456160 467 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC108059.3-201ENST00000456388 214 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC019084.1-201ENST00000457337 432 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RPL21P8-201ENST00000465083 535 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RPS26P24-201ENST00000497656 331 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 SEPT14P8-201ENST00000508026 178 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC144568.1-201ENST00000520139 137 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-323P-201ENST00000521915 107 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AL049779.2-201ENST00000553847 315 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC024619.4-201ENST00000580924 316 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 AL590240.4-201ENST00000616908 390 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 OLMALINC-203ENST00000641087 3779 ntBASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
TRIM35Q9UPQ4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AL109809.4-201ENST00000603520 2185 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.240-201ENST00000364469 95 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 RNA5SP205-201ENST00000364653 136 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.497-201ENST00000384447 98 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 MIR625-201ENST00000385047 85 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 EIF5P1-201ENST00000400019 1231 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 RPL19P1-201ENST00000411635 428 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AL035551.1-201ENST00000446931 348 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC002553.3-201ENST00000453002 341 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 HMGB1P4-201ENST00000455362 567 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AP001992.1-205ENST00000462248 379 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC087884.1-201ENST00000469738 328 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 DUX4L52-201ENST00000549363 777 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 MIR4271-201ENST00000582451 67 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AL118522.2-201ENST00000616045 615 ntBASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.07□□□□□ -1.12
TRIM35Q9UPQ4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRIM35Q9UPQ4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms