Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AL035425.3-201ENST00000564206 4996 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC119744.1-201ENST00000454746 1715 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 RPL23AP94-201ENST00000512518 302 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 MIR5680-201ENST00000577577 84 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC008507.1-201ENST00000587506 734 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC124312.4-201ENST00000605533 310 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC090525.3-201ENST00000605601 189 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 AC138932.5-201ENST00000617759 563 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 MIR6852-201ENST00000621699 66 ntBASIC4.39□□□□□ -1.71
NPC1L1Q9UHC9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 U3.19-201ENST00000390893 196 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 TAF9BP1-201ENST00000396646 746 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 RNU2-17P-201ENST00000410290 190 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC236972.1-201ENST00000433225 199 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 MTND4P15-201ENST00000437913 1033 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC092685.1-201ENST00000447960 1243 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 RPL23AP23-201ENST00000452590 471 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 MIR4716-201ENST00000579628 84 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 MIR4513-201ENST00000581077 86 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 MIR4512-201ENST00000583257 77 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 KATNBL1P5-201ENST00000605015 517 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 AC100793.4-201ENST00000613683 429 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 uc_338.25-201ENST00000613756 156 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 MIR1264-201ENST00000616374 69 ntBASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPC1L1Q9UHC9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 TATDN1P1-201ENST00000414123 891 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 GTF2IP23-201ENST00000423746 351 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 UBE2V1P1-201ENST00000430836 445 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 CST9LP2-201ENST00000437612 320 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 RNU7-170P-201ENST00000459303 61 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC111193.1-201ENST00000504097 155 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 FTH1P9-201ENST00000513251 355 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC104027.1-201ENST00000521887 300 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC004024.1-201ENST00000549244 247 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 CBX3P5-201ENST00000552017 521 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC135507.2-201ENST00000612443 309 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 MIR7973-1-201ENST00000614683 76 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 AL118496.1-201ENST00000440201 1812 ntBASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPC1L1Q9UHC9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 AC118273.1-201ENST00000525324 3006 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 SNORA62.2-201ENST00000364672 152 ntBASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPC1L1Q9UHC9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms