Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 AC027104.1-201ENST00000563702 681 ntBASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 AC005412.1-201ENST00000580812 1049 ntBASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 AC073592.7-201ENST00000623659 507 ntBASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 AL732372.2-225ENST00000642124 456 ntBASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CLIP2Q9UDT6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 RNU6-543P-201ENST00000362576 108 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 RNU6-796P-201ENST00000391086 107 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC097713.2-201ENST00000430199 356 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 ARF4P2-201ENST00000430209 526 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC074367.1-201ENST00000438685 1125 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC068135.1-201ENST00000446164 246 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 RPL26P28-201ENST00000451325 435 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 MRPS31P2-201ENST00000451581 518 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 U3.44-201ENST00000458938 192 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC096992.1-201ENST00000459808 709 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC104689.1-201ENST00000473356 768 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 MTND3P3-201ENST00000505004 126 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 MTND3P24-201ENST00000506306 329 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 ARL2BPP6-201ENST00000512757 439 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC008494.2-201ENST00000514544 370 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 RN7SKP234-201ENST00000517173 224 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 CENPUP2-201ENST00000555897 1186 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC104229.1-201ENST00000561364 255 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC106734.1-201ENST00000568646 663 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AP000919.1-202ENST00000581139 1264 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC125494.3-201ENST00000602759 455 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC007179.3-201ENST00000604976 235 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 MIR7851-201ENST00000610611 160 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AL162574.2-201ENST00000614618 657 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 FRG1HP-204ENST00000617940 757 ntBASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP2Q9UDT6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP2Q9UDT6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 RNA5SP72-201ENST00000364442 117 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 RNVU1-14-201ENST00000384770 164 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AL136116.1-201ENST00000403591 381 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 HMGB3P18-201ENST00000406327 590 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 VN1R42P-201ENST00000424651 344 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 MTATP6P11-201ENST00000428071 670 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 USP9YP31-201ENST00000431405 881 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 SDR42E1P3-201ENST00000438345 502 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 HMGB3P8-201ENST00000449709 577 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AL139174.1-201ENST00000531489 886 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 PDCL2P2-201ENST00000533651 189 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AP004242.1-201ENST00000533701 349 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC022146.1-201ENST00000595307 847 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC022079.2-201ENST00000619739 566 ntBASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP2Q9UDT6 AC024595.1-201ENST00000623088 387 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms