Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.61□□□□□ -1.67
HDAC6Q9UBN7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.61□□□□□ -1.67
HDAC6Q9UBN7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 XPOTP1-201ENST00000443317 2398 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 PTMAP2-201ENST00000397627 327 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC233981.1-201ENST00000423224 461 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC007389.2-201ENST00000434630 306 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 OR6K5P-201ENST00000447050 945 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AL451050.1-201ENST00000450126 415 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 Z99714.1-201ENST00000450463 807 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 HMGN3P1-201ENST00000453847 193 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 MTND6P6-201ENST00000478031 263 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 WBP1LP4-201ENST00000505043 344 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC118465.1-201ENST00000513820 1271 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 RNA5SP143-201ENST00000516936 115 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AP001189.2-201ENST00000527320 189 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AP003461.1-201ENST00000528866 78 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 HSPE1P5-201ENST00000561489 272 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC079171.1-201ENST00000568788 914 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AL451086.1-201ENST00000605596 223 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AP003392.5-201ENST00000607857 415 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC064801.1-201ENST00000612025 407 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 AC090246.1-201ENST00000616499 426 ntBASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.6□□□□□ -1.67
HDAC6Q9UBN7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RN7SKP44-201ENST00000363602 316 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 Y_RNA.192-201ENST00000363977 102 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AL121978.1-201ENST00000402778 359 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 HSPE1P12-201ENST00000412576 301 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AL161631.1-201ENST00000417933 486 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AL445584.1-201ENST00000431451 330 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RPL37P1-201ENST00000432310 284 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 SETP8-201ENST00000435341 628 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC006011.1-201ENST00000442758 349 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 VN1R34P-201ENST00000447387 883 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RPL21P134-201ENST00000453468 483 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 NECAP1P2-201ENST00000455668 727 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RPL38P1-201ENST00000460914 211 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RN7SL585P-201ENST00000470538 280 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 GAPDHP36-201ENST00000480688 918 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AP000563.1-201ENST00000490865 758 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC116353.3-201ENST00000511215 249 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 OR4A2P-201ENST00000527276 913 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AP000926.4-201ENST00000527351 454 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 PDCL2P2-201ENST00000533651 189 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 GTF2IP8-201ENST00000560687 584 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC093519.1-201ENST00000566109 298 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 MIR5685-201ENST00000579080 79 ntBASIC4.59□□□□□ -1.67
HDAC6Q9UBN7 AC005412.1-201ENST00000580812 1049 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms