Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RPS7P15-201ENST00000415804 584 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RPL31P45-201ENST00000419532 356 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 SDCBPP2-201ENST00000424643 885 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 HMGB1P45-201ENST00000435986 653 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 PRSS3P4-201ENST00000453323 162 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 DNAJC19P1-201ENST00000455312 319 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 snoU13.7-201ENST00000459220 104 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RPL37P6-202ENST00000464216 403 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RPL21P103-201ENST00000479921 488 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 SNORA70.14-201ENST00000516205 110 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 RN7SKP234-201ENST00000517173 224 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 MTND2P7-201ENST00000521337 640 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 IGJP1-201ENST00000522682 475 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AF279873.1-201ENST00000523393 313 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 MIR4789-201ENST00000577469 82 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC017100.2-201ENST00000584628 355 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AP000720.1-201ENST00000625091 483 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCF1Q9UBD9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC066616.2-201ENST00000559334 1481 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 MTND4P8-201ENST00000514997 1362 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 U6.112-201ENST00000384129 70 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 MIR124-3-201ENST00000384866 87 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RPL22P22-201ENST00000395439 379 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 HSPE1P8-201ENST00000406997 288 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RHEBP3-201ENST00000411920 351 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RPS15AP40-201ENST00000419621 391 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC017083.1-201ENST00000428093 483 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 OR51B8P-201ENST00000449892 769 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 CDC42P1-201ENST00000456658 548 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AP000926.1-201ENST00000479573 241 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC092902.1-201ENST00000486999 259 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RPS27P23-201ENST00000487608 251 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC005798.1-201ENST00000513715 387 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RNU6-488P-201ENST00000515918 99 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AP003355.1-201ENST00000518956 587 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 MTND2P26-201ENST00000528255 1029 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 KLKP1-201ENST00000595979 403 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 LLPHP1-201ENST00000603571 367 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AC006077.1-201ENST00000604746 343 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AL034351.1-201ENST00000605288 668 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 MIR7975-201ENST00000619350 68 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AP003355.3-201ENST00000623465 114 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 AL590396.4-201ENST00000636779 956 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
CLCF1Q9UBD9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms