Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AC233981.1-201ENST00000423224 461 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AC027176.1-201ENST00000560204 514 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AC026790.2-201ENST00000606282 430 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 ELF2P3-201ENST00000445099 1506 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 RPS20P32-201ENST00000456044 356 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 CYCSP20-201ENST00000473154 315 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC090525.1-201ENST00000479116 478 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 RN7SKP60-201ENST00000516985 239 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC006960.1-201ENST00000419980 153 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 SRIP1-201ENST00000489235 288 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC008549.1-201ENST00000512900 643 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC079089.3-201ENST00000603094 673 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AL591516.1-201ENST00000611326 274 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 AC022960.2-201ENST00000616300 666 ntBASIC3.81□□□□□ -1.8
PHRF1Q9P1Y6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 MIR196B-201ENST00000384852 84 ntBASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 RPL29P29-201ENST00000448725 423 ntBASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.8□□□□□ -1.8
PHRF1Q9P1Y6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC046144.1-201ENST00000478559 1853 ntBASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AL138827.1-201ENST00000402666 306 ntBASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AP001025.2-201ENST00000490908 477 ntBASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 SERPINE4P-201ENST00000554978 281 ntBASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PHRF1Q9P1Y6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 MTCO1P52-201ENST00000433928 531 ntBASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 RPL7L1P1-201ENST00000448259 785 ntBASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PHRF1Q9P1Y6 RN7SKP285-201ENST00000410137 318 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 RNA5SP508-201ENST00000411327 119 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 RNA5SP282-201ENST00000516355 108 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 OOSP1P2-201ENST00000579644 351 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 AC064859.1-201ENST00000624741 174 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.77□□□□□ -1.81
PHRF1Q9P1Y6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms