Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MIR16-1-201ENST00000385271 89 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RPS26P8-201ENST00000393490 348 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ERHP2-201ENST00000402323 299 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MTCO2P31-201ENST00000402702 684 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL008987.1-201ENST00000415528 237 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ELOCP9-201ENST00000418624 239 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RPF2P1-201ENST00000424137 906 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 NPM1P24-201ENST00000428039 894 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RPL23AP1-201ENST00000428990 471 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RPS3AP54-201ENST00000435535 734 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 COX6CP18-201ENST00000448769 222 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 TPMTP4-201ENST00000450749 678 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MRPS31P2-201ENST00000451581 518 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 NECAP1P2-201ENST00000455668 727 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RPL23AP24-201ENST00000458203 385 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MTCO2P6-201ENST00000463134 685 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL132838.2-201ENST00000492041 314 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC108941.1-201ENST00000502853 530 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC118282.2-201ENST00000508739 374 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC113347.3-201ENST00000509113 148 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC008494.2-201ENST00000514544 370 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC087369.1-201ENST00000520775 996 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC008562.1-201ENST00000521763 330 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MTCO2P15-201ENST00000532655 656 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL442163.2-201ENST00000553912 710 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AADACP1-206ENST00000561502 1193 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC008751.2-201ENST00000597885 980 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC025588.2-201ENST00000604851 466 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AC091953.3-201ENST00000623220 236 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MFSD8-245ENST00000641743 948 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 AP005901.5-201ENST00000545779 1796 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDE1Q9NXR1 SGO1P1-201ENST00000603525 1447 ntBASIC3.68□□□□□ -1.82
NDE1Q9NXR1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC025263.3-201ENST00000622965 1396 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 RNU6-413P-201ENST00000384115 107 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 MIR141-201ENST00000384975 95 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL590084.1-201ENST00000407885 387 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 RAB28P1-201ENST00000411517 641 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC108032.1-201ENST00000416706 207 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 PAICSP7-201ENST00000419829 962 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 RPL30P3-201ENST00000424262 333 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 MTCO1P3-201ENST00000429327 192 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 HMGB3P8-201ENST00000449709 577 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC006480.1-201ENST00000449887 378 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC079776.3-201ENST00000450665 370 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC009220.1-201ENST00000451614 275 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL513533.1-201ENST00000453728 415 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL136097.1-201ENST00000456945 913 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC006511.1-201ENST00000470614 315 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC011352.3-201ENST00000505162 593 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 MTND2P38-201ENST00000522536 667 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 BPTFP1-201ENST00000579209 492 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AP001180.3-201ENST00000582221 145 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 PCNAP1-202ENST00000595299 752 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms